RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RFXAPO00287 272 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 AMHP03971 560 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 SREBF1P36956 1147 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 CLK2P49760 499 aaKnown RBP18.45■□□□□ 0.54
COL1A1-205ENST00000476387 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 FAM26DQ5JW98 314 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 JAKMIP3Q5VZ66 844 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 TMCO2Q7Z6W1 182 aaPredicted RBP18.45■□□□□ 0.54
COL1A1-205ENST00000476387 RPAINQ86UA6 219 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 MICALL1Q8N3F8 863 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 SEPT8Q92599 483 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 ERAP1Q9NZ08 941 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 PKD2L1Q9P0L9 805 aa18.45■□□□□ 0.54
COL1A1-205ENST00000476387 GSTTP1A0A1W2PQM5 241 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 CDKL5O76039 1030 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 ZNF76P36508 570 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-205ENST00000476387 SMARCAD1Q9H4L7 1026 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 INSL6Q9Y581 213 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 MICAL3Q7RTP6 2002 aa18.44■□□□□ 0.54
COL1A1-205ENST00000476387 DEXIO95424 95 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 CTSHP09668 335 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 ERVK-21P61565 698 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 PPFIA1Q13136 1202 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 GRB10Q13322 594 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 CEP55Q53EZ4 464 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL1A1-205ENST00000476387 APBB2Q92870 758 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 TGS1Q96RS0 853 aaKnown RBP18.43■□□□□ 0.54
COL1A1-205ENST00000476387 MXRA8Q9BRK3 442 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 JPH1Q9HDC5 661 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-205ENST00000476387 SH3GLB2Q9NR46 395 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 KCNH7Q9NS40 1196 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 REV3LO60673 3130 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 NFASCO94856 1347 aa18.43■□□□□ 0.54
COL1A1-205ENST00000476387 MBLAC1A4D2B0 266 aaPredicted RBP18.42■□□□□ 0.54
COL1A1-205ENST00000476387 LINC01553A4QN01 128 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 LPXNO60711 386 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 SEC24BO95487 1268 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 AK2P54819 239 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 HTRA4P83105 476 aaPredicted RBP18.42■□□□□ 0.54
COL1A1-205ENST00000476387 AAK1Q2M2I8 961 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 SPRED2Q7Z698 418 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 MYOCDQ8IZQ8 938 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 GLG1Q92896 1179 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 SLC9A2Q9UBY0 812 aa18.42■□□□□ 0.54
COL1A1-205ENST00000476387 MUC3AQ02505 3323 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 RPLP2P05387 115 aaKnown RBP18.41■□□□□ 0.54
COL1A1-205ENST00000476387 NLRP5P59047 1200 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 SCRN1Q12765 414 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 GRIK4Q16099 956 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 RSPH3Q86UC2 560 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 SP7Q8TDD2 431 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-205ENST00000476387 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
COL1A1-205ENST00000476387 SDF4Q9BRK5 362 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 TUBE1Q9UJT0 475 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 TPCN1Q9ULQ1 816 aa18.41■□□□□ 0.54
COL1A1-205ENST00000476387 RRN3P2A6NIE6 340 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 PFKFB2O60825 505 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 MARK3P27448 753 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 NEK4P51957 841 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 SKIV2LQ15477 1246 aaKnown RBP18.4■□□□□ 0.54
COL1A1-205ENST00000476387 FAM117BQ6P1L5 589 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 RUFY4Q6ZNE9 571 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 NIPA1Q7RTP0 329 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 CYP2W1Q8TAV3 490 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 RASGRP4Q8TDF6 673 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 ADAMTS19Q8TE59 1207 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 TOP1MTQ969P6 601 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
COL1A1-205ENST00000476387 AZI2Q9H6S1 392 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 COG5Q9UP83 839 aa18.4■□□□□ 0.54
COL1A1-205ENST00000476387 MYH9P35579 1960 aaKnown RBP18.4■□□□□ 0.54
COL1A1-205ENST00000476387 BDP1A6H8Y1 2624 aa18.39■□□□□ 0.54
COL1A1-205ENST00000476387 TNFRSF10AO00220 468 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 MEIS1O00470 390 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 CHRNA1P02708 482 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 MGAT3Q09327 533 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 C8orf34Q49A92 452 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 MARCH8Q5T0T0 291 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 KRT40Q6A162 431 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 FAM177A1Q8N128 213 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-205ENST00000476387 GDPD5Q8WTR4 605 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 PCYT2Q99447 389 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 SUGCTQ9HAC7 445 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 AGO4Q9HCK5 861 aaKnown RBP18.39■□□□□ 0.53
COL1A1-205ENST00000476387 STK36Q9NRP7 1315 aa18.39■□□□□ 0.53
COL1A1-205ENST00000476387 COL4A4P53420 1690 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-205ENST00000476387 COL4A6Q14031 1691 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 SIP14410 1827 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-205ENST00000476387 CYP3A4P08684 503 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 ARP10275 920 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms