RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 NCANO14594 1321 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 TRAF5O00463 557 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 MAN2B1O00754 1011 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 LTFP02788 710 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 VIL1P09327 827 aaKnown RBP7□□□□□ -1.29
PTCD3-211ENST00000476215 CYP2C8P10632 490 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 MECP2P51608 486 aaKnown RBP7□□□□□ -1.29
PTCD3-211ENST00000476215 TUSC3Q13454 348 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 KCTD1Q719H9 257 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 KRT26Q7Z3Y9 468 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 PNPLA5Q7Z6Z6 429 aaPredicted RBP7□□□□□ -1.29
PTCD3-211ENST00000476215 TRIM48Q8IWZ4 208 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 NLGN4XQ8N0W4 816 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 ARRDC4Q8NCT1 418 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 FEZF2Q8TBJ5 459 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 TEPSINQ96N21 525 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 GORASP1Q9BQQ3 440 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 YIPF4Q9BSR8 244 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 NGRNQ9NPE2 291 aaKnown RBP7□□□□□ -1.29
PTCD3-211ENST00000476215 HSPBP1Q9NZL4 362 aa7□□□□□ -1.29
PTCD3-211ENST00000476215 SLC12A8A0AV02 714 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 PTPDC1A2A3K4 754 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 KRT37O76014 449 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 GRIN1Q05586 938 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 NFIXQ14938 502 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 SEPT7Q16181 437 aaKnown RBP6.99□□□□□ -1.29
PTCD3-211ENST00000476215 ARHGAP44Q17R89 818 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 SKOR2Q2VWA4 1001 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-211ENST00000476215 FIGNQ5HY92 759 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 ZFYVE27Q5T4F4 411 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 HHIPL2Q6UWX4 724 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 DDX46Q7L014 1031 aaKnown RBP6.99□□□□□ -1.29
PTCD3-211ENST00000476215 CARFQ8N187 725 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 CLEC4DQ8WXI8 215 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 C11orf84Q9BUA3 381 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-211ENST00000476215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTCD3-211ENST00000476215 B4GALT6Q9UBX8 382 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 ZKSCAN5Q9Y2L8 839 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 TELO2Q9Y4R8 837 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 ATP23Q9Y6H3 246 aa6.99□□□□□ -1.29
PTCD3-211ENST00000476215 ZNF891A8MT65 544 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-211ENST00000476215 PRRG2O14669 202 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 GAS7O60861 476 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 THBS2P35442 1172 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 KCNC1P48547 511 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 SCNN1BP51168 640 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 SART3Q15020 963 aaKnown RBP6.98□□□□□ -1.29
PTCD3-211ENST00000476215 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 PRR31Q5SQ13 230 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 KIF18BQ86Y91 864 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 NXPE1Q8N323 547 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 KYQ8NBH2 561 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 SYT8Q8NBV8 401 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 RELTQ969Z4 430 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 ORAI3Q9BRQ5 295 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 BOCQ9BWV1 1114 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 RIC8BQ9NVN3 520 aa6.98□□□□□ -1.29
PTCD3-211ENST00000476215 SCDO00767 359 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 HIP1RO75146 1068 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 F2P00734 622 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 NCLP19338 710 aaKnown RBP6.97□□□□□ -1.29
PTCD3-211ENST00000476215 EPHA5P54756 1037 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 IRF9Q00978 393 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 STRN3Q13033 797 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 BTBD8Q5XKL5 378 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 CPZQ66K79 652 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 OTOP1Q7RTM1 612 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 ZC3H18Q86VM9 953 aaKnown RBP6.97□□□□□ -1.29
PTCD3-211ENST00000476215 OR2W6PQ8NHA6 318 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 DDX11Q96FC9 970 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 NTMQ9P121 344 aa6.97□□□□□ -1.29
PTCD3-211ENST00000476215 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 B8ZZF3 427 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 NOBOXO60393 691 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 CLASP2O75122 1294 aaKnown RBP6.96□□□□□ -1.3
PTCD3-211ENST00000476215 PTPN1P18031 435 aaKnown RBP6.96□□□□□ -1.3
PTCD3-211ENST00000476215 RPL13P26373 211 aaKnown RBP6.96□□□□□ -1.3
PTCD3-211ENST00000476215 STAT5AP42229 794 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 ITGA1P56199 1179 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 PTPROQ16827 1216 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 FSTL4Q6MZW2 842 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 NOSTRINQ8IVI9 506 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 ADGRG2Q8IZP9 1017 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 FAM26EQ8N5C1 309 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 TTLL6Q8N841 843 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 TTLL11Q8NHH1 800 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 ZBTB8AQ96BR9 441 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 TOE1Q96GM8 510 aaKnown RBP6.96□□□□□ -1.3
PTCD3-211ENST00000476215 DTLQ9NZJ0 730 aa6.96□□□□□ -1.3
PTCD3-211ENST00000476215 FAM90A27PA6NNH2 459 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 H7C1D1 291 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 FOXD2O60548 495 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-211ENST00000476215 ATP2A2P16615 1042 aaKnown RBP6.95□□□□□ -1.3
PTCD3-211ENST00000476215 GJA4P35212 333 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 NFKB2Q00653 900 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 DSG1Q02413 1049 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 DHCR24Q15392 516 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 PAN2Q504Q3 1202 aaKnown RBP6.95□□□□□ -1.3
PTCD3-211ENST00000476215 CD300LDQ6UXZ3 194 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 STRA8Q7Z7C7 330 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms