RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
BEST3-204ENST00000476098 TNFAIP2Q03169 654 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
BEST3-204ENST00000476098 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 ELOA2Q8IYF1 753 aaPredicted RBP13.04□□□□□ -0.32
BEST3-204ENST00000476098 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 KCTD17Q8N5Z5 321 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 PXYLP1Q8TE99 480 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 SEPT1Q8WYJ6 367 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 SYAP1Q96A49 352 aaPredicted RBP13.04□□□□□ -0.32
BEST3-204ENST00000476098 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 GPR20Q99678 358 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 MTRQ99707 1265 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 LXNQ9BS40 222 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 GNEQ9Y223 722 aaKnown RBP13.04□□□□□ -0.32
BEST3-204ENST00000476098 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
BEST3-204ENST00000476098 PLXNA1Q9UIW2 1896 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 IGKV6D-21A0A0A0MT36 114 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 FOXN1O15353 648 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 PSAPP07602 524 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 UGCGQ16739 394 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 KANK3Q6NY19 840 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
BEST3-204ENST00000476098 RAD54LQ92698 747 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 PAGE5Q96GU1 130 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 PCYT2Q99447 389 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 ZSWIM4Q9H7M6 989 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 KBTBD4Q9NVX7 518 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
BEST3-204ENST00000476098 E9PMD0 336 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.32
BEST3-204ENST00000476098 ZBTB39O15060 712 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 LYPLA2O95372 231 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 HMGCRP04035 888 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.32
BEST3-204ENST00000476098 PSMC5P62195 406 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 STAMQ92783 540 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 TNMDQ9H2S6 317 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 DNM3Q9UQ16 869 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.32
BEST3-204ENST00000476098 MCM3APO60318 1980 aa13.02□□□□□ -0.32
BEST3-204ENST00000476098 MGAMO43451 1857 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 CTAGE5O15320 804 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 DYNC1LI2O43237 492 aaPredicted RBP13.02□□□□□ -0.33
BEST3-204ENST00000476098 ZNF862O60290 1169 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
BEST3-204ENST00000476098 AKR1A1P14550 325 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 AFMP43652 599 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 MCM6Q14566 821 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 ZSCAN23Q3MJ62 389 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 MAP3K21Q5TCX8 1036 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.33
BEST3-204ENST00000476098 C4orf19Q8IY42 314 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 OR6J1Q8NGC5 347 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 PPTC7Q8NI37 304 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 LARP4BQ92615 738 aaKnown RBP13.02□□□□□ -0.33
BEST3-204ENST00000476098 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
BEST3-204ENST00000476098 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 GZF1Q9H116 711 aaPredicted RBP13.02□□□□□ -0.33
BEST3-204ENST00000476098 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 PTCH2Q9Y6C5 1203 aa13.02□□□□□ -0.33
BEST3-204ENST00000476098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
BEST3-204ENST00000476098 BACH1O14867 736 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 SEPT4O43236 478 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 LGR5O75473 907 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 STBD1O95210 358 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 PLA2G4BP0C869 781 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 HSPA8P11142 646 aaKnown RBP13.01□□□□□ -0.33
BEST3-204ENST00000476098 ATP4AP20648 1035 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 SLC12A3P55017 1021 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 PNOCQ13519 176 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 POSTNQ15063 836 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 SV2BQ7L1I2 683 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 AFAP1L1Q8TED9 768 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 ERCC4Q92889 916 aaPredicted RBP13.01□□□□□ -0.33
BEST3-204ENST00000476098 ATP6V0A1Q93050 837 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 PTPN22Q9Y2R2 807 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 Q9Y3F1 56 aa13.01□□□□□ -0.33
BEST3-204ENST00000476098 IGSF9BQ9UPX0 1349 aa13□□□□□ -0.33
BEST3-204ENST00000476098 A6NJR5 290 aa13□□□□□ -0.33
BEST3-204ENST00000476098 DUSP11O75319 330 aaKnown RBP13□□□□□ -0.33
BEST3-204ENST00000476098 PPFIA4O75335 1185 aa13□□□□□ -0.33
BEST3-204ENST00000476098 EYA4O95677 639 aa13□□□□□ -0.33
BEST3-204ENST00000476098 PRR29P0C7W0 189 aa13□□□□□ -0.33
BEST3-204ENST00000476098 XRCC6P12956 609 aaKnown RBP eCLIP13□□□□□ -0.33
BEST3-204ENST00000476098 HOXD8P13378 290 aaPredicted RBP13□□□□□ -0.33
BEST3-204ENST00000476098 CASP1P29466 404 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms