RNA–Protein interactions for RNA: ENST00000475033.5

CHRNA4-204, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 2

Gene CHRNA4, Length 3,660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-204ENST00000475033 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.12
CHRNA4-204ENST00000475033 SEC16BQ96JE7 1060 aa14.27□□□□□ -0.12
CHRNA4-204ENST00000475033 TRIM9Q9C026 710 aa14.27□□□□□ -0.12
CHRNA4-204ENST00000475033 SPATS2LQ9NUQ6 558 aaKnown RBP14.27□□□□□ -0.12
CHRNA4-204ENST00000475033 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.12
CHRNA4-204ENST00000475033 LRRC10BA6NIK2 292 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 HMGB1P1B2RPK0 211 aaPredicted RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 FTCDO95954 541 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 RASSF7Q02833 373 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 CYP4A11Q02928 519 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 ICA1Q05084 483 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 TBC1D10BQ4KMP7 808 aaPredicted RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 RRAGAQ7L523 313 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 SH3RF1Q7Z6J0 888 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 ADGRF4Q8IZF3 695 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 CAVIN3Q969G5 261 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 ZMYND12Q9H0C1 365 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 PKD2L1Q9P0L9 805 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 EIF4A3P38919 411 aaKnown RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 ZKSCAN8Q15776 578 aaPredicted RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 ARMC2Q8NEN0 867 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 MTRQ99707 1265 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 PACSIN2Q9UNF0 486 aaPredicted RBP14.27□□□□□ -0.13
CHRNA4-204ENST00000475033 XIRP1Q702N8 1843 aaKnown RBP14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 ZBED6P86452 979 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 NFIAQ12857 509 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 TBC1D1Q86TI0 1168 aaPredicted RBP14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 NOD2Q9HC29 1040 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 STRCQ7RTU9 1775 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 H0YIN7 160 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 GKAP1Q5VSY0 366 aaPredicted RBP14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 ANKRD40Q6AI12 368 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 CCDC170Q8IYT3 715 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 ATP6V0A4Q9HBG4 840 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 NOVA2Q9UNW9 492 aaKnown RBP14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 L3MBTL1Q9Y468 752 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 KIF11P52732 1056 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 IRF2BP1Q8IU81 584 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 ZBTB10Q96DT7 871 aa14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 PDS5AQ29RF7 1337 aaKnown RBP14.26□□□□□ -0.13
CHRNA4-204ENST00000475033 EME2A4GXA9 379 aaPredicted RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 MEIS1O00470 390 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 ZNF263O14978 683 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CFBP00751 764 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 HSPA1LP34931 641 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CRKP46108 304 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 MAP2K1Q02750 393 aaPredicted RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CCDC65Q8IXS2 484 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 IQCKQ8N0W5 287 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CASKIN2Q8WXE0 1202 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 YIPF3Q9GZM5 350 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 SH2D4AQ9H788 454 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 KANSL2Q9H9L4 492 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 PNMA6FA0A0J9YX94 578 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CLRN2A0PK11 232 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 TCP10L2B9ZVM9 353 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 KIF4AO95239 1232 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 DRP2Q13474 957 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 SEPT2Q15019 361 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 FAM133BQ5BKY9 247 aaKnown RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 DDX12PQ92771 950 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CUEDC2Q9H467 287 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 SMIM23A6NLE4 172 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 SLC37A4O43826 429 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 IFFO1Q0D2I5 559 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 ITGB3BPQ13352 177 aaPredicted RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 RAPGEF1Q13905 1077 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 DCAF17Q5H9S7 520 aaPredicted RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 GPATCH4Q5T3I0 446 aaKnown RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 CCDC63Q8NA47 563 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 ERMNQ8TAM6 284 aa14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 DDX4Q9NQI0 724 aaKnown RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 SEPT11Q9NVA2 429 aaKnown RBP14.25□□□□□ -0.13
CHRNA4-204ENST00000475033 NID2Q14112 1375 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 TBCAO75347 108 aaKnown RBP14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 UBXN2AP68543 259 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 FAM26FQ5R3K3 315 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 SPAG5Q96R06 1193 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 PANK4Q9NVE7 773 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 HGSO14964 777 aaPredicted RBP14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 RHBDL3P58872 404 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 CDC42EP5Q6NZY7 148 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 CCDC174Q6PII3 467 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 DDX42Q86XP3 938 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 SP8Q8IXZ3 490 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 NOX5Q96PH1 765 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 SELENOSQ9BQE4 189 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 THAP9Q9H5L6 903 aa14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 TDRD3Q9H7E2 651 aaKnown RBP14.24□□□□□ -0.13
CHRNA4-204ENST00000475033 A0A1W2PQC6 194 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms