RNA–Protein interactions for RNA: ENST00000474904.5

GPATCH4-206, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-206ENST00000474904 SHHQ15465 462 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 TMEM240Q5SV17 173 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 PSRC1Q6PGN9 363 aaPredicted RBP12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 RPUSD2Q8IZ73 545 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 RDM1Q8NG50 284 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 GLG1Q92896 1179 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 FAM20AQ96MK3 541 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 AZI2Q9H6S1 392 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 KCNMB3Q9NPA1 279 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
GPATCH4-206ENST00000474904 RRN3P2A6NIE6 340 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 CXCL10P02778 98 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 RPLP2P05387 115 aaKnown RBP12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 CKBP12277 381 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 SELPP16109 830 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 SFNP31947 248 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 TRIM29Q14134 588 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 GPNMBQ14956 572 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 MIS18BP1Q6P0N0 1132 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 RETREG2Q8NC44 543 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 PPP1R13LQ8WUF5 828 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 HERVK_113Q902F9 699 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 ATP6V0A1Q93050 837 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 C8orf76Q96K31 380 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 FOXP1Q9H334 677 aaPredicted RBP12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 SETD4Q9NVD3 440 aa12.23□□□□□ -0.45
GPATCH4-206ENST00000474904 EVPLQ92817 2033 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 WDR64B1ANS9 1081 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 TREHO43280 583 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 PSAPP07602 524 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 CCL23P55773 120 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 ORC2Q13416 577 aaPredicted RBP12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 LETM2Q2VYF4 491 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 MARCH8Q5T0T0 291 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 LRCH2Q5VUJ6 765 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 CCDC60Q8IWA6 550 aaPredicted RBP12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 ATP8B4Q8TF62 1192 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 WNT8BQ93098 351 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 DISC1Q9NRI5 854 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 KIF3AQ9Y496 699 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 COL6A3P12111 3177 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 TRANK1O15050 2925 aa12.22□□□□□ -0.45
GPATCH4-206ENST00000474904 COL1A2P08123 1366 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 MYO9BQ13459 2157 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 SLC37A4O43826 429 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 HBP1O60381 514 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 GAS7O60861 476 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 FGBP02675 491 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 INSRRP14616 1297 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 ATP4AP20648 1035 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 JAK3P52333 1124 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 CHMP4BP1P59074 171 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 PPP2R5CQ13362 524 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 CUL4AQ13619 759 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 GRIK4Q16099 956 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 FAM26DQ5JW98 314 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 ZNF365Q70YC5 407 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 LRRC8DQ7L1W4 858 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 FAM184AQ8NB25 1140 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 HAS1Q92839 578 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 SCLYQ96I15 445 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 TEKT3Q9BXF9 490 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 ZNF302Q9NR11 478 aa12.21□□□□□ -0.45
GPATCH4-206ENST00000474904 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 CCNT1O60563 726 aaKnown RBP12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 TRAPPC10P48553 1259 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 SMAD3P84022 425 aaKnown RBP12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 MBTPS1Q14703 1052 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 ZNF484Q5JVG2 852 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 ZNF618Q5T7W0 954 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 FAM109BQ6ICB4 259 aaPredicted RBP12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 FAM43BQ6ZT52 329 aaPredicted RBP12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 SLFN12Q8IYM2 578 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
GPATCH4-206ENST00000474904 UNC45AQ9H3U1 944 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms