RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 METTL7BQ6UX53 244 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 POTEDQ86YR6 584 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 KAT2BQ92831 832 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 MTMR9Q96QG7 549 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 PCYT2Q99447 389 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 FTOQ9C0B1 505 aaKnown RBP eCLIP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 DDX25Q9UHL0 483 aaKnown RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 VAV3Q9UKW4 847 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 PCDHB6Q9Y5E3 794 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 GRIN2DO15399 1336 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 EVPLQ92817 2033 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 ZDBF2Q9HCK1 2354 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 RFXAPO00287 272 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 GH1P01241 217 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 HSP90AA1P07900 732 aaKnown RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 MMP3P08254 477 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 GCFC2P16383 781 aaKnown RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 MCM7P33993 719 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 TRAPPC10P48553 1259 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 PURAQ00577 322 aaKnown RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 LAMC2Q13753 1193 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 NEDD9Q14511 834 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 GNASQ5JWF2 1037 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 TTC38Q5R3I4 469 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 FOXD4L5Q5VV16 416 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 CXCL17Q6UXB2 119 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 C16orf59Q7L2K0 433 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 NLRX1Q86UT6 975 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 OR6J1Q8NGC5 347 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 PPTC7Q8NI37 304 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 PPP1R13LQ8WUF5 828 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 FOXD4L4Q8WXT5 416 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 CDHR1Q96JP9 859 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 SPATA33Q96N06 139 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 GPR20Q99678 358 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 ZNF577Q9BSK1 485 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 C16orf70Q9BSU1 422 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 SLC28A3Q9HAS3 691 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 MSRAQ9UJ68 235 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 COG5Q9UP83 839 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 YBX2Q9Y2T7 364 aaKnown RBP7.91□□□□□ -1.14
LIMD1-204ENST00000474665 NFASCO94856 1347 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 REV3LO60673 3130 aa7.91□□□□□ -1.14
LIMD1-204ENST00000474665 IGKV6D-21A0A0A0MT36 114 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 RBAK-RBAKDNI3L0D1 243 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 DDX39AO00148 427 aaKnown RBP7.9□□□□□ -1.14
LIMD1-204ENST00000474665 EML1O00423 815 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 KIAA0355O15063 1070 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 GFRA3O60609 400 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 ATG7O95352 703 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 ASGR1P07306 291 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 CLTBP09497 229 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 ZSCAN22P10073 491 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-204ENST00000474665 ACLYP53396 1101 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 ACTR2P61160 394 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 SETQ01105 290 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-204ENST00000474665 SP4Q02446 784 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 HIC1Q14526 733 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 PTPAQ15257 358 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 BRAPQ7Z569 592 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 TRIM50Q86XT4 487 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 DHX37Q8IY37 1157 aaKnown RBP7.9□□□□□ -1.14
LIMD1-204ENST00000474665 GJD3Q8N144 294 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 ARRDC4Q8NCT1 418 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 PRSS33Q8NF86 280 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 HLA-CQ95604 372 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 RIT2Q99578 217 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 TSEN34Q9BSV6 310 aaKnown RBP7.9□□□□□ -1.14
LIMD1-204ENST00000474665 AP5M1Q9H0R1 490 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 UNC45AQ9H3U1 944 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 JPH1Q9HDC5 661 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-204ENST00000474665 SLC9A2Q9UBY0 812 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 CLIC4Q9Y696 253 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 WDFY4Q6ZS81 3184 aa7.9□□□□□ -1.14
LIMD1-204ENST00000474665 TET1Q8NFU7 2136 aa7.9□□□□□ -1.15
LIMD1-204ENST00000474665 A0A1W2PQ45 241 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-204ENST00000474665 A0A1W2PQY0 241 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 KBTBD13C9JR72 458 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 HAS3O00219 553 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 TBX3O15119 743 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 NEMFO60524 1076 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 PPFIA4O75335 1185 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 LGR5O75473 907 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 STBD1O95210 358 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 F13A1P00488 732 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 LGALS2P05162 132 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 ZNF286BP0CG31 522 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 ALADP13716 330 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 ATP4AP20648 1035 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 PSMC6P62333 389 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 PTGDRQ13258 359 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 PPP2R5CQ13362 524 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 GNL2Q13823 731 aaKnown RBP7.89□□□□□ -1.15
LIMD1-204ENST00000474665 CALCRLQ16602 461 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 RILPL1Q5EBL4 403 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 TMEM240Q5SV17 173 aa7.89□□□□□ -1.15
LIMD1-204ENST00000474665 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 1881.6 ms