RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ALCAMQ13740 583 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 SAMD1Q6SPF0 538 aaPredicted RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 RAD9BQ6WBX8 426 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 C1orf186Q6ZWK4 172 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 FRMD5Q7Z6J6 570 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 TPH2Q8IWU9 490 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 TRPM4Q8TD43 1214 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 UNC45AQ9H3U1 944 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 METTL14Q9HCE5 456 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 AGO4Q9HCK5 861 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 TYW1Q9NV66 732 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 DBR1Q9UK59 544 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 ZHX2Q9Y6X8 837 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 FAM13AO94988 1023 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 IPO7O95373 1038 aaKnown RBP24.04■■□□□ 1.44
CCM2-206ENST00000474617 SLU7O95391 586 aaKnown RBP24.04■■□□□ 1.44
CCM2-206ENST00000474617 JAK3P52333 1124 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 ZNF131P52739 623 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 RPS6P62753 249 aaKnown RBP24.04■■□□□ 1.44
CCM2-206ENST00000474617 MTMR1Q13613 665 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 LRRC41Q15345 812 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 MIER3Q7Z3K6 550 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 GOLGA5Q8TBA6 731 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 CDHR1Q96JP9 859 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 PCMTD1Q96MG8 357 aaPredicted RBP24.04■■□□□ 1.44
CCM2-206ENST00000474617 PARVGQ9HBI0 331 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 RGL1Q9NZL6 768 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 PHIPQ8WWQ0 1821 aa24.04■■□□□ 1.44
CCM2-206ENST00000474617 MAPTP10636 758 aaKnown RBP24.03■■□□□ 1.44
CCM2-206ENST00000474617 SFR1Q86XK3 245 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 SLC17A8Q8NDX2 589 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 REPS2Q8NFH8 660 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.03■■□□□ 1.44
CCM2-206ENST00000474617 GPRASP2Q96D09 838 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 TEX13BQ9BXU2 312 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 ZHX3Q9H4I2 956 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 COL20A1Q9P218 1284 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 DNAI1Q9UI46 699 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 SIK3Q9Y2K2 1263 aa24.03■■□□□ 1.44
CCM2-206ENST00000474617 CCND2P30279 289 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 CASQ1P31415 396 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 KRT76Q01546 638 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 PGM5Q15124 567 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 CATSPERGQ6ZRH7 1159 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 NLRX1Q86UT6 975 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 TRIM59Q8IWR1 403 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 TXLNBQ8N3L3 684 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 ZKSCAN4Q969J2 545 aaPredicted RBP24.02■■□□□ 1.44
CCM2-206ENST00000474617 RMDN3Q96TC7 470 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 LXNQ9BS40 222 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 MRPL44Q9H9J2 332 aaKnown RBP24.02■■□□□ 1.44
CCM2-206ENST00000474617 PXMP2Q9NR77 195 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 RNF146Q9NTX7 359 aa24.02■■□□□ 1.44
CCM2-206ENST00000474617 EPN1Q9Y6I3 576 aaPredicted RBP24.02■■□□□ 1.44
CCM2-206ENST00000474617 NPHP3-ACAD11A0A0J9YXS1 232 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 DKC1O60832 514 aaKnown RBP eCLIP24.01■■□□□ 1.43
CCM2-206ENST00000474617 NDUFA10O95299 355 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 ERVK-24P63145 666 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 ADAM9Q13443 819 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 CTTNQ14247 550 aaKnown RBP24.01■■□□□ 1.43
CCM2-206ENST00000474617 ARHGAP29Q52LW3 1261 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 MUM1L1Q5H9M0 696 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 ARHGEF16Q5VV41 709 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 EHBP1Q8NDI1 1231 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 SYN2Q92777 582 aaPredicted RBP24.01■■□□□ 1.43
CCM2-206ENST00000474617 ATG4CQ96DT6 458 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 PDCD2LQ9BRP1 358 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 RUSC1Q9BVN2 902 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 AFG3L2Q9Y4W6 797 aa24.01■■□□□ 1.43
CCM2-206ENST00000474617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.01■■□□□ 1.43
CCM2-206ENST00000474617 ARHGEF35A5YM69 484 aa24■■□□□ 1.43
CCM2-206ENST00000474617 CHMP2AO43633 222 aa24■■□□□ 1.43
CCM2-206ENST00000474617 GNG11P61952 73 aa24■■□□□ 1.43
CCM2-206ENST00000474617 UBXN2AP68543 259 aa24■■□□□ 1.43
CCM2-206ENST00000474617 MYBPC2Q14324 1141 aa24■■□□□ 1.43
CCM2-206ENST00000474617 NEK11Q8NG66 645 aa24■■□□□ 1.43
CCM2-206ENST00000474617 PLAGL2Q9UPG8 496 aa24■■□□□ 1.43
CCM2-206ENST00000474617 SCAF8Q9UPN6 1271 aaKnown RBP24■■□□□ 1.43
CCM2-206ENST00000474617 PCDHB13Q9Y5F0 798 aa24■■□□□ 1.43
CCM2-206ENST00000474617 SBF1O95248 1867 aa24■■□□□ 1.43
CCM2-206ENST00000474617 DHX15O43143 795 aaKnown RBP24■■□□□ 1.43
CCM2-206ENST00000474617 QARSP47897 775 aaKnown RBP24■■□□□ 1.43
CCM2-206ENST00000474617 HMGCS2P54868 508 aa24■■□□□ 1.43
CCM2-206ENST00000474617 TUBB4BP68371 445 aa24■■□□□ 1.43
CCM2-206ENST00000474617 MAP3K9P80192 1104 aa24■■□□□ 1.43
CCM2-206ENST00000474617 GLIS3Q8NEA6 775 aa24■■□□□ 1.43
CCM2-206ENST00000474617 NSUN6Q8TEA1 469 aaKnown RBP24■■□□□ 1.43
CCM2-206ENST00000474617 UIMC1Q96RL1 719 aa24■■□□□ 1.43
CCM2-206ENST00000474617 SENP7Q9BQF6 1050 aa24■■□□□ 1.43
CCM2-206ENST00000474617 MKNK1Q9BUB5 465 aa24■■□□□ 1.43
CCM2-206ENST00000474617 HAUS4Q9H6D7 363 aa24■■□□□ 1.43
CCM2-206ENST00000474617 CGNQ9P2M7 1197 aaKnown RBP24■■□□□ 1.43
CCM2-206ENST00000474617 SSC5DA1L4H1 1573 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 RLFQ13129 1914 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 PPP1R12BO60237 982 aaPredicted RBP23.99■■□□□ 1.43
CCM2-206ENST00000474617 NR2F2P24468 414 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 EPS15P42566 896 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 MRPS9P82933 396 aaKnown RBP23.99■■□□□ 1.43
CCM2-206ENST00000474617 TMEM174Q8WUU8 243 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 DCPSQ96C86 337 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms