RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 PABPC1P11940 636 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 RRADP55042 308 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 DGCR2P98153 550 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 USP10Q14694 798 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 PRKD1Q15139 912 aaPredicted RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 KIZQ2M2Z5 673 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 USP39Q53GS9 565 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 HABP4Q5JVS0 413 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 AGBL4Q5VU57 503 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 NSMFQ6X4W1 530 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 ANKS3Q6ZW76 656 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 IFNL2Q8IZJ0 200 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 FUKQ8N0W3 1084 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 SH3RF2Q8TEC5 729 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 KATNBL1Q9H079 304 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 SLITRK6Q9H5Y7 841 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 R3HCC1Q9Y3T6 440 aaKnown RBP5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 TRAF6Q9Y4K3 522 aa5.64□□□□□ -1.51
TMEM50B-208ENST00000474272 CHGBP05060 677 aa5.63□□□□□ -1.51
TMEM50B-208ENST00000474272 DNAJA1P31689 397 aaKnown RBP5.63□□□□□ -1.51
TMEM50B-208ENST00000474272 FOXE3Q13461 319 aa5.63□□□□□ -1.51
TMEM50B-208ENST00000474272 DDR2Q16832 855 aa5.63□□□□□ -1.51
TMEM50B-208ENST00000474272 RNF151Q2KHN1 245 aa5.63□□□□□ -1.51
TMEM50B-208ENST00000474272 HS1BP3Q53T59 392 aa5.63□□□□□ -1.51
TMEM50B-208ENST00000474272 EPHA5P54756 1037 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 GPR85P60893 370 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 ARID5AQ03989 594 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 FHL2Q14192 279 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 RNF207Q6ZRF8 634 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 IFNL3Q8IZI9 196 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 DPYSL5Q9BPU6 564 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 CARD11Q9BXL7 1154 aa5.62□□□□□ -1.51
TMEM50B-208ENST00000474272 FAM90A27PA6NNH2 459 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 FAM47E-STBD1D6RA91 191 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 FGFR1P11362 822 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 RAC3P60763 192 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 DBPQ10586 325 aaPredicted RBP5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 GNL2Q13823 731 aaKnown RBP5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 BTBD8Q5XKL5 378 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 STYK1Q6J9G0 422 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 Q6ZSN1 163 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 REXO1L1PQ8IX06 675 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 SLC43A3Q8NBI5 491 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 ZNF503Q96F45 646 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 CSRNP2Q9H175 543 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 RIC8BQ9NVN3 520 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 NUB1Q9Y5A7 615 aa5.61□□□□□ -1.51
TMEM50B-208ENST00000474272 COMTP21964 271 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 POLD1P28340 1107 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 ADCY8P40145 1251 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 IFRD2Q12894 506 aaPredicted RBP5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 TBR1Q16650 682 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 ARHGAP36Q6ZRI8 547 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 SGSM3Q96HU1 749 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 OR14A2Q96R54 314 aa5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 PDGFDQ9GZP0 370 aaPredicted RBP5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 C12orf65Q9H3J6 166 aaKnown RBP5.6□□□□□ -1.51
TMEM50B-208ENST00000474272 MATN2O00339 956 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 KCNK3O14649 394 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 KLF4O43474 513 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 CDC14BO60729 498 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 CR2P20023 1033 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 TOP3AQ13472 1001 aaPredicted RBP5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 WDR72Q3MJ13 1102 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 ZNF568Q3ZCX4 644 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 MIIPQ5JXC2 388 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 OSTM1Q86WC4 334 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 SREK1Q8WXA9 508 aaKnown RBP5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 GMLQ99445 158 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 ZFYVE21Q9BQ24 234 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 ALG1Q9BT22 464 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 ARHGAP28Q9P2N2 729 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 CDC42EP3Q9UKI2 254 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 OAZ3Q9UMX2 235 aa5.59□□□□□ -1.51
TMEM50B-208ENST00000474272 TRAV20A0A0B4J274 112 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 ZNF202O95125 648 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 PTPN1P18031 435 aaKnown RBP5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 KRT15P19012 456 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 KCNQ1P51787 676 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 LARP4Q71RC2 724 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 PTRH1Q86Y79 214 aaKnown RBP5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 EDAQ92838 391 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 KIAA1683Q9H0B3 1180 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 CATSPERZQ9NTU4 200 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 PCDHA8Q9Y5H6 950 aa5.58□□□□□ -1.52
TMEM50B-208ENST00000474272 IQCA1LA6NCM1 817 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 NARSO43776 548 aaKnown RBP5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 IGSF3O75054 1194 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 RAD17O75943 681 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 AMY2AP04746 511 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 C1SP09871 688 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 SRGAP2CP0DJJ0 459 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 PDE6AP16499 860 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 AMY2BP19961 511 aa5.57□□□□□ -1.52
TMEM50B-208ENST00000474272 MC4RP32245 332 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms