RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 STXBP3O00186 592 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 EIF5BO60841 1220 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 UPP2O95045 317 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 CHRNA1P02708 482 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 KCNQ1P51787 676 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 ADCY7P51828 1080 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 RCAN1P53805 252 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 FGD1P98174 961 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 FUT2Q10981 343 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 GRIK4Q16099 956 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 SAMD11Q96NU1 681 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 YME1L1Q96TA2 773 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 SDF4Q9BRK5 362 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 AZI2Q9H6S1 392 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 JPH1Q9HDC5 661 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 CDC27P30260 824 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 AP3B2Q13367 1082 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 CEP55Q53EZ4 464 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 CYP2W1Q8TAV3 490 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 C17orf80Q9BSJ5 609 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 ANO3Q9BYT9 981 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 FAM217BQ9NTX9 383 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 BARHL2Q9NY43 387 aa12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-216ENST00000474258 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 MYO7AQ13402 2215 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 COL4A6Q14031 1691 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 SEC24BO95487 1268 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 ARP10275 920 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 GHRP10912 638 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 INSRRP14616 1297 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 ZNF76P36508 570 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 STAT5BP51692 787 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 ACTR2P61160 394 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 IGBP1P78318 339 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 MGAT3Q09327 533 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 PTPROQ16827 1216 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 EPC2Q52LR7 807 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 PLPPR4Q7Z2D5 763 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 PCYT2Q99447 389 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
SEMA4D-216ENST00000474258 MEIS1O00470 390 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 ENPP3O14638 875 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 ATG7O95352 703 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 ADD1P35611 737 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 SREBF1P36956 1147 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 METAP2P50579 478 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 LPIN1Q14693 890 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 PFKFB3Q16875 520 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 FBXO47Q5MNV8 452 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 IER5Q5VY09 327 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 Q6ZUG5 572 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 TMEM192Q8IY95 271 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 KCNB2Q92953 911 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 NECAB3Q96P71 396 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
SEMA4D-216ENST00000474258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 H3BNC9 293 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 M0QZ92 97 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 SCG2P13521 617 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 CPA1P15085 419 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 HSPA4P34932 840 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 SLC26A2P50443 739 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 MRPS6P82932 125 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 APOBRQ0VD83 1088 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 ITGB3BPQ13352 177 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 PLCB4Q15147 1175 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 BLOC1S2Q6QNY1 142 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 TSHZ1Q6ZSZ6 1077 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 FIBCD1Q8N539 461 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 JAKMIP1Q96N16 626 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 FAM49AQ9H0Q0 323 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 PCDHA2Q9Y5H9 948 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 SQORQ9Y6N5 450 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 KIAA1671Q9BY89 1806 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 XIRP2A4UGR9 3374 aa12.6□□□□□ -0.39
SEMA4D-216ENST00000474258 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
SEMA4D-216ENST00000474258 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
SEMA4D-216ENST00000474258 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
SEMA4D-216ENST00000474258 CYP3A4P08684 503 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms