RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 DNAAF5Q86Y56 855 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 ACTRT1Q8TDG2 376 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 NFS1Q9Y697 457 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 CETN3O15182 167 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 KRT18P05783 430 aaKnown RBP15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 UIMC1Q96RL1 719 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 NEUROG2Q9H2A3 272 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 FBXL5Q9UKA1 691 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 KIAA1024Q9UPX6 916 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 NOC2LQ9Y3T9 749 aaKnown RBP15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 KRIT1O00522 736 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 TMOD1P28289 359 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 GSCP56915 257 aaPredicted RBP15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 DDR1Q08345 913 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 BIRC3Q13489 604 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 C6orf89Q6UWU4 347 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 GPBP1Q86WP2 473 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 SCFD1Q8WVM8 642 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 CCDC114Q96M63 670 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 GPCPD1Q9NPB8 672 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 KLC4Q9NSK0 619 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 PCDHA12Q9UN75 941 aa15.58■□□□□ 0.08
NHLRC3-204ENST00000473371 GOLGA6L7A0A1B0GV03 622 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 PDHBP11177 359 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 SMTNP53814 917 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 PLCB4Q15147 1175 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 HAS1Q92839 578 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 CALR3Q96L12 384 aaKnown RBP15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 RTFDC1Q9BY42 306 aaPredicted RBP15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 NT5C3AQ9H0P0 336 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 HDAC9Q9UKV0 1011 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 PLA2G4BP0C869 781 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 SLC9A1P19634 815 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 RDXP35241 583 aaKnown RBP15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 KCNQ4P56696 695 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 DRP2Q13474 957 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 MTMR3Q13615 1198 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 ALKBH5Q6P6C2 394 aaKnown RBP15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 IRF2BP2Q7Z5L9 587 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 KCTD10Q9H3F6 313 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 CD248Q9HCU0 757 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 SLC12A6Q9UHW9 1150 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 KDM3AQ9Y4C1 1321 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 IRS2Q9Y4H2 1338 aa15.57■□□□□ 0.08
NHLRC3-204ENST00000473371 CDR1P51861 262 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 PPP2R2AP63151 447 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 KCTD19Q17RG1 926 aaPredicted RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 PEX26Q7Z412 305 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 DDX20Q9UHI6 824 aaKnown RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 NAGPAQ9UK23 515 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 NOVA2Q9UNW9 492 aaKnown RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 BZW2Q9Y6E2 419 aaKnown RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 CCDC188H7C350 402 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 CHUKO15111 745 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 DAPK3O43293 454 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 NR2F2P24468 414 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 AGBL2Q5U5Z8 902 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 LRRC47Q8N1G4 583 aaKnown RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 LRRC57Q8N9N7 239 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 TRAPPC3O43617 180 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 FLT3P36888 993 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 TPCN2Q8NHX9 752 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 ACTR5Q9H9F9 607 aaPredicted RBP15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 SLC40A1Q9NP59 571 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 AMACRQ9UHK6 382 aa15.56■□□□□ 0.08
NHLRC3-204ENST00000473371 UCHL3P15374 230 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 ASPRV1Q53RT3 343 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 DHX37Q8IY37 1157 aaKnown RBP15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 C3orf20Q8ND61 904 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 POTEB3A0JP26 581 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 POTECB2RU33 542 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 BACH1O14867 736 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 KCNQ2O43526 872 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 FLOT1O75955 427 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 ITGA4P13612 1032 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 QPCTQ16769 361 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 KRT71Q3SY84 523 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 POTEBQ6S5H4 581 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 SLC51AQ86UW1 340 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 CCDC26Q8TAB7 109 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 GPR101Q96P66 508 aaPredicted RBP15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 ARMCX3Q9UH62 379 aaPredicted RBP15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 RASSF9O75901 435 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 AFPP02771 609 aaKnown RBP15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 EIF6P56537 245 aaKnown RBP15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 EDRF1Q3B7T1 1238 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 ZNF804AQ7Z570 1209 aa15.55■□□□□ 0.08
NHLRC3-204ENST00000473371 DPH5Q9H2P9 285 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms