RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PLEKHA8P1O95397 391 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 EYA4O95677 639 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 RB1P06400 928 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 ARP10275 920 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 MFAP1P55081 439 aaKnown RBP11.11□□□□□ -0.63
MCF2L-223ENST00000473345 TMEM62Q0P6H9 643 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 NEDD9Q14511 834 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 GRIK4Q16099 956 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 PAN2Q504Q3 1202 aaKnown RBP11.11□□□□□ -0.63
MCF2L-223ENST00000473345 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 KLHL23Q8NBE8 558 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 CDHR5Q9HBB8 845 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 CD207Q9UJ71 328 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 TTC3P53804 2025 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 LOC730098B7Z3J9 87 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 STXBP3O00186 592 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 VCPP55072 806 aaKnown RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 IGBP1P78318 339 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 BTG3Q14201 252 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 UBE2SQ16763 222 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 RBM23Q86U06 439 aaKnown RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 RAB11FIP4Q86YS3 637 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 MB21D2Q8IYB1 491 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 SRBD1Q8N5C6 995 aaKnown RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 SMRP1Q8NCR6 262 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 CYP2W1Q8TAV3 490 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 EDAQ92838 391 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 FAM49AQ9H0Q0 323 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 LMAN2LQ9H0V9 348 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 CNNM2Q9H8M5 875 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-223ENST00000473345 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
MCF2L-223ENST00000473345 KMT2EQ8IZD2 1858 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 PLXNA4Q9HCM2 1894 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 TMEM221A6NGB7 291 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 E7EWF7 191 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 M0R296 226 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 PER2O15055 1255 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 PDGFBP01127 241 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-223ENST00000473345 INSRRP14616 1297 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 RXRAP19793 462 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 NT5C2P49902 561 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 MRPS6P82932 125 aaKnown RBP11.09□□□□□ -0.63
MCF2L-223ENST00000473345 TMEM266Q2M3C6 531 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 TSHZ1Q6ZSZ6 1077 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 POF1BQ8WVV4 589 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 TMEM40Q8WWA1 233 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
MCF2L-223ENST00000473345 USP15Q9Y4E8 981 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-223ENST00000473345 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 ADAMTS3O15072 1205 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 STAM2O75886 525 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 GNAT1P11488 350 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 NRIP1P48552 1158 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 ERVFC1P60507 584 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 ZXDAP98168 799 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 CBX2Q14781 532 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-223ENST00000473345 GNPTABQ3T906 1256 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 BMP8AQ7Z5Y6 402 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 CMTR2Q8IYT2 770 aaKnown RBP11.08□□□□□ -0.64
MCF2L-223ENST00000473345 EFHBQ8N7U6 833 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 ZNF215Q9UL58 517 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-223ENST00000473345 PADI3Q9ULW8 664 aa11.08□□□□□ -0.64
MCF2L-223ENST00000473345 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 CHMLP26374 656 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 NDUFV1P49821 464 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 COASYQ13057 564 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 ITGB3BPQ13352 177 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-223ENST00000473345 KCNC3Q14003 757 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 WTAPQ15007 396 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 FAM102BQ5T8I3 360 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 TAF2Q6P1X5 1199 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 ZNF654Q8IZM8 581 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 SMARCC2Q8TAQ2 1214 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 SUSD6Q92537 303 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 P2RX5Q93086 422 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 GPRASP2Q96D09 838 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 SNX27Q96L92 541 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 PLVAPQ9BX97 442 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 KCNH6Q9H252 994 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 SMOC2Q9H3U7 446 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms