RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 S1PR4O95977 384 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 NDUFB10O96000 172 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 TFAP4Q01664 338 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 PKP1Q13835 747 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 RTN1Q16799 776 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 SYNE3Q6ZMZ3 975 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 CATIPQ7Z7H3 387 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 ZNF444Q8N0Y2 327 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 CPXCR1Q8N123 301 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 ANKRD35Q8N283 1001 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 PHTF2Q8N3S3 785 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 NSUN7Q8NE18 718 aaKnown RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 PHOSPHO2Q8TCD6 241 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 GDPD5Q8WTR4 605 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 FOXD4L4Q8WXT5 416 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 ANKS1AQ92625 1134 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 PKNOX2Q96KN3 472 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 UIMC1Q96RL1 719 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 SEZ6LQ9BYH1 1024 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 UBE2ZQ9H832 354 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 SLC38A10Q9HBR0 1119 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 PDGFCQ9NRA1 345 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 CACNA1BQ00975 2339 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 WDR87Q6ZQQ6 2873 aa7.34□□□□□ -1.24
HDAC1-205ENST00000472928 C5orf42Q9H799 3197 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 PTPRSQ13332 1948 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 F5H6K3 240 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 DYNC1LI2O43237 492 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 DHX16O60231 1041 aaKnown RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 PPFIA3O75145 1194 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 DDAH1O94760 285 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 CTDNEP1O95476 244 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 IL9P15248 144 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 RCAN1P53805 252 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 NUCB2P80303 420 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 HMGN5P82970 282 aaKnown RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 KLRC3Q07444 240 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 LEXMQ3ZCV2 418 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 CCDC178Q5BJE1 867 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 TAPT1Q6NXT6 567 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 CPLX2Q6PUV4 134 aaKnown RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 TMTC2Q8N394 836 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 PRPF38AQ8NAV1 312 aaKnown RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 CHST13Q8NET6 341 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 CHMP4CQ96CF2 233 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 LLPHQ9BRT6 129 aaKnown RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 KAT14Q9H8E8 782 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 A1CFQ9NQ94 594 aaKnown RBP7.33□□□□□ -1.24
HDAC1-205ENST00000472928 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 KIF3AQ9Y496 699 aa7.33□□□□□ -1.24
HDAC1-205ENST00000472928 NCOR2Q9Y618 2525 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CARNS1A5YM72 827 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 RBAK-RBAKDNI3L0D1 243 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 STX6O43752 255 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 ZEB2O60315 1214 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 ZBED4O75132 1171 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CDKL5O76039 1030 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 IQCF3P0C7M6 154 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CALM1P0DP23 149 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CALM2P0DP24 149 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CALM3P0DP25 149 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 ACTN1P12814 892 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 ALADP13716 330 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 PDCP20941 246 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 KCNA5P22460 613 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CDC27P30260 824 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 RFC2P35250 354 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 OAZ1P54368 228 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
HDAC1-205ENST00000472928 GPNMBQ14956 572 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 RCSD1Q6JBY9 416 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 POTEGQ6S5H5 508 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 TMCO2Q7Z6W1 182 aaPredicted RBP7.32□□□□□ -1.24
HDAC1-205ENST00000472928 ZBTB33Q86T24 672 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 RNF135Q8IUD6 432 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 FAM184AQ8NB25 1140 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 NEDD1Q8NHV4 660 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 SMARCC2Q8TAQ2 1214 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 TNPO1Q92973 898 aaKnown RBP7.32□□□□□ -1.24
HDAC1-205ENST00000472928 KIFC2Q96AC6 838 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 CEP95Q96GE4 821 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 AP5M1Q9H0R1 490 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 KCNH6Q9H252 994 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 SUGCTQ9HAC7 445 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 IL17RBQ9NRM6 502 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 HOMER2Q9NSB8 354 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 FBXO40Q9UH90 709 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 STX8Q9UNK0 236 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 MTMR7Q9Y216 660 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
HDAC1-205ENST00000472928 Q9Y3F1 56 aa7.32□□□□□ -1.24
HDAC1-205ENST00000472928 EP300Q09472 2414 aaPredicted RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ZNF536O15090 1300 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 CNTNAP5Q8WYK1 1306 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms