RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KAT5Q92993 513 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 TBC1D20Q96BZ9 403 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 MYD88Q99836 296 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 HERPUD2Q9BSE4 406 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 SELENOOQ9BVL4 669 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 RNF38Q9H0F5 515 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.26□□□□□ -1.89
XRN1-210ENST00000472697 GBP3Q9H0R5 595 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 ATP6V0A4Q9HBG4 840 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 CATSPERZQ9NTU4 200 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 AP5S1Q9NUS5 200 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 SLC45A1Q9Y2W3 748 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 TELO2Q9Y4R8 837 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 PCDHB12Q9Y5F1 795 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 NPFFR2Q9Y5X5 522 aa3.26□□□□□ -1.89
XRN1-210ENST00000472697 GRIN2BQ13224 1484 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 WNT10BO00744 389 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 INMTO95050 263 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CELA3BP08861 270 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ADH5P11766 374 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 JUPP14923 745 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 KIF11P52732 1056 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CDK17Q00537 523 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 RASSF7Q02833 373 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 PAK1Q13153 545 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 GRM1Q13255 1194 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 BIRC3Q13489 604 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 PMS2P11Q13670 270 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 NBPF8Q3BBV2 869 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ANKRD39Q53RE8 183 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 FAM209BQ5JX69 171 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CCDC62Q6P9F0 684 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 KIAA1958Q8N8K9 716 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 C2orf69Q8N8R5 385 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ASB12Q8WXK4 309 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ORAI3Q9BRQ5 295 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 DSCC1Q9BVC3 393 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ALG13Q9NP73 1137 aaKnown RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 CLIC5Q9NZA1 410 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 MSRAQ9UJ68 235 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 GTF2A1LQ9UNN4 478 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 WASHC2AQ641Q2 1341 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 PPRC1Q5VV67 1664 aaKnown RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 ELL2O00472 640 aaPredicted RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 TRIM38O00635 465 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 SCDO00767 359 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 B3GALT2O43825 422 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 TMEM127O75204 238 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 MBD4O95243 580 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CST3P01034 146 aaPredicted RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 TYRP1P17643 537 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 LORP23490 312 aaPredicted RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 HOXC12P31275 282 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 BCL6P41182 706 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ZNF143P52747 638 aaPredicted RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 GJA9P57773 515 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 G3BP1Q13283 466 aaKnown RBP eCLIP3.25□□□□□ -1.89
XRN1-210ENST00000472697 SURF1Q15526 300 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ALFQ53S48 1182 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 SLC45A4Q5BKX6 768 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 FAM182BQ5T319 152 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 JAKMIP3Q5VZ66 844 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CCDC70Q6NSX1 233 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CDPF1Q6NVV7 123 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 JMJD6Q6NYC1 403 aaPredicted RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 C1orf122Q6ZSJ8 110 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 KIAA1211Q6ZU35 1233 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 ZNF354CQ86Y25 554 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 SMAP1Q8IYB5 467 aaPredicted RBP3.25□□□□□ -1.89
XRN1-210ENST00000472697 DCAF4Q8WV16 495 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CHAMP1Q96JM3 812 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CERS4Q9HA82 394 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 RXFP1Q9HBX9 757 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 MRGBPQ9NV56 204 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 NR2E3Q9Y5X4 410 aa3.25□□□□□ -1.89
XRN1-210ENST00000472697 CEP170Q5SW79 1584 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 ERBB4Q15303 1308 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 SNAPC4Q5SXM2 1469 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 FAM234BA2RU67 622 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 PAPLNO95428 1278 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 PHKG2P15735 406 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 AGXTP21549 392 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 CTSSP25774 331 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 CD68P34810 354 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 IREB2P48200 963 aaKnown RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 MAPK10P53779 464 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 CNN3Q15417 329 aaKnown RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 POMZP3Q6PJE2 187 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 KCNK18Q7Z418 384 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 PCGF5Q86SE9 256 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 NOSTRINQ8IVI9 506 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.24□□□□□ -1.89
XRN1-210ENST00000472697 SMYD4Q8IYR2 804 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 TEX19Q8NA77 164 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 SLC16A10Q8TF71 515 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 TSPEARQ8WU66 669 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 BARD1Q99728 777 aaKnown RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 TMPRSS13Q9BYE2 586 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 C22orf23Q9BZE7 217 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms