RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 SMG5Q9UPR3 1016 aaKnown RBP6.88□□□□□ -1.31
SIK3-208ENST00000472648 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 DSPP15924 2871 aaKnown RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 CNOT1A5YKK6 2376 aaKnown RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 SPAG17Q6Q759 2223 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 SLC30A4O14863 429 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 FSCN2O14926 492 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 CHRNA1P02708 482 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 PROS1P07225 676 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 SLC3A2P08195 630 aaKnown RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 IBSPP21815 317 aaPredicted RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 CA8P35219 290 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 GATMP50440 423 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 ARHGAP4P98171 946 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 TFAP4Q01664 338 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 APOBRQ0VD83 1088 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 LPIN1Q14693 890 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 HSDL1Q3SXM5 330 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 ATAT1Q5SQI0 421 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 ZSCAN25Q6NSZ9 544 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 TSHZ1Q6ZSZ6 1077 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 ARHGAP45Q92619 1136 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 IWS1Q96ST2 819 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 GPR20Q99678 358 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 C16orf70Q9BSU1 422 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 FTHL17Q9BXU8 183 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 EHMT1Q9H9B1 1298 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 NGRNQ9NPE2 291 aaKnown RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 WNT16Q9UBV4 365 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 PUF60Q9UHX1 559 aaKnown RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 GMEB2Q9UKD1 530 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 CA14Q9ULX7 337 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 SIT1Q9Y3P8 196 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 HCFC2Q9Y5Z7 792 aa6.87□□□□□ -1.31
SIK3-208ENST00000472648 PDCD11Q14690 1871 aaKnown RBP6.87□□□□□ -1.31
SIK3-208ENST00000472648 WDR19Q8NEZ3 1342 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 KRBA1A5PL33 1030 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 GSG1L2A8MUP6 293 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 HIDE1A8MVS5 230 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 NOP56O00567 594 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 NARSO43776 548 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 EIF3JO75822 258 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 GGPS1O95749 300 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 CHGBP05060 677 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 LGALS2P05162 132 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 CT47B1P0C2W7 299 aaPredicted RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 SCG2P13521 617 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 SHC2P98077 582 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 NONOQ15233 471 aaKnown RBP eCLIP6.86□□□□□ -1.31
SIK3-208ENST00000472648 ZNF528Q3MIS6 628 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 USH1GQ495M9 461 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 CELF3Q5SZQ8 465 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 ARHGEF16Q5VV41 709 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 KCNV1Q6PIU1 500 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 BTNL9Q6UXG8 535 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 CCDC149Q6ZUS6 474 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 OTOP3Q7RTS5 596 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 RSPH3Q86UC2 560 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 COLGALT1Q8NBJ5 622 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 DDX1Q92499 740 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 MRPS27Q92552 414 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 TAAR1Q96RJ0 339 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 RMDN3Q96TC7 470 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 PUS7LQ9H0K6 701 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 BCL11AQ9H165 835 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 C1orf115Q9H7X2 142 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 MLXIPQ9HAP2 919 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 KCNK12Q9HB15 430 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 IL1RAPL2Q9NP60 686 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 GPCPD1Q9NPB8 672 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 SETD4Q9NVD3 440 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 DZANK1Q9NVP4 752 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 ZMIZ1Q9ULJ6 1067 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 LZTS1Q9Y250 596 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 EXOC6BQ9Y2D4 811 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 PCDHGA2Q9Y5H1 932 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 LOC400499M0QZD8 3231 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 MYH9P35579 1960 aaKnown RBP6.86□□□□□ -1.31
SIK3-208ENST00000472648 WDR81Q562E7 1941 aa6.86□□□□□ -1.31
SIK3-208ENST00000472648 LAMA1P25391 3075 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 FRMPD2Q68DX3 1309 aaPredicted RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 NRCAMQ92823 1304 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 POTEMA6NI47 508 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 SPDYE4A6NLX3 237 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 TBKBP1A7MCY6 615 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 LAMTOR5O43504 91 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 APPP05067 770 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 IFIT2P09913 472 aaKnown RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 LAG3P18627 525 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 PMLP29590 882 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 CD52P31358 61 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 SLFN5Q08AF3 891 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 MGAT3Q09327 533 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms