RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 TRIM71Q2Q1W2 868 aaKnown RBP16.32■□□□□ 0.2
ABCF3-209ENST00000472608 EPC2Q52LR7 807 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 TYW1BQ6NUM6 668 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 USP17L6PQ6QN14 398 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 VSIG10LQ86VR7 867 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 SMARCC2Q8TAQ2 1214 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 C5orf42Q9H799 3197 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 GTF2IRD1Q9UHL9 959 aa16.32■□□□□ 0.2
ABCF3-209ENST00000472608 STAM2O75886 525 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 GNA11P29992 359 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 MCM2P49736 904 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
ABCF3-209ENST00000472608 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 PRSS33Q8NF86 280 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 CCDC148Q8NFR7 591 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 CACNA1HO95180 2353 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 ZDBF2Q9HCK1 2354 aa16.31■□□□□ 0.2
ABCF3-209ENST00000472608 NCK2O43639 380 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 LARGE1O95461 756 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 MMP3P08254 477 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 EIF2AK2P19525 551 aaKnown RBP16.3■□□□□ 0.2
ABCF3-209ENST00000472608 LTBRP36941 435 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 CLK2P49760 499 aaKnown RBP16.3■□□□□ 0.2
ABCF3-209ENST00000472608 ADCY7P51828 1080 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 PTPN5P54829 565 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 PTK7Q13308 1070 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 PGM5Q15124 567 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 SMAD2Q15796 467 aaKnown RBP16.3■□□□□ 0.2
ABCF3-209ENST00000472608 CTC1Q2NKJ3 1217 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 FAM117BQ6P1L5 589 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 AFG1LQ8WV93 481 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 MYO7AQ13402 2215 aa16.3■□□□□ 0.2
ABCF3-209ENST00000472608 SPDYE3A6NKU9 549 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 LGR5O75473 907 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 CCND2P30279 289 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 GALNT17Q6IS24 598 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 KCNV1Q6PIU1 500 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 WASF1Q92558 559 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 EDAQ92838 391 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 PRRX2Q99811 253 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
ABCF3-209ENST00000472608 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
ABCF3-209ENST00000472608 EHMT1Q9H9B1 1298 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 COL4A6Q14031 1691 aa16.29■□□□□ 0.2
ABCF3-209ENST00000472608 HAS3O00219 553 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 AMHP03971 560 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 TGFB3P10600 412 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 XBP1P17861 261 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 FOXK2Q01167 660 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 GPM6BQ13491 265 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
ABCF3-209ENST00000472608 WNT8BQ93098 351 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 POP1Q99575 1024 aaKnown RBP16.28■□□□□ 0.2
ABCF3-209ENST00000472608 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-209ENST00000472608 MUTYHQ9UIF7 546 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 PCDHA6Q9UN73 950 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 PCDHA8Q9Y5H6 950 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
ABCF3-209ENST00000472608 EMSYQ7Z589 1322 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 PPFIA3O75145 1194 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 GH1P01241 217 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 UBE2SQ16763 222 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 IER5LQ5T953 404 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 RNF135Q8IUD6 432 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 TMEM192Q8IY95 271 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 DBF4BQ8NFT6 615 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 TOP1MTQ969P6 601 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
ABCF3-209ENST00000472608 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
ABCF3-209ENST00000472608 ZFHX2Q9C0A1 2572 aaPredicted RBP16.27■□□□□ 0.19
ABCF3-209ENST00000472608 MBTPS2O43462 519 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 F2P00734 622 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
ABCF3-209ENST00000472608 FDPSP14324 419 aaKnown RBP16.26■□□□□ 0.19
ABCF3-209ENST00000472608 ICAM3P32942 547 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 PSEN2P49810 448 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 NLRP5P59047 1200 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 CHMP4BP1P59074 171 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 MRPS9P82933 396 aaKnown RBP16.26■□□□□ 0.19
ABCF3-209ENST00000472608 ST3GAL1Q11201 340 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 TCF15Q12870 199 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 DGKDQ16760 1214 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 PLEKHG4Q58EX7 1191 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 RPAINQ86UA6 219 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 REXO1Q8N1G1 1221 aaKnown RBP16.26■□□□□ 0.19
ABCF3-209ENST00000472608 C7orf31Q8N865 590 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 DAGLBQ8NCG7 672 aa16.26■□□□□ 0.19
ABCF3-209ENST00000472608 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms