RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 HCSTQ9UBK5 93 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 GINS2Q9Y248 185 aa11.62□□□□□ -0.55
SCAMP3-205ENST00000472397 DDX39AO00148 427 aaKnown RBP11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 PER2O15055 1255 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 PRC1O43663 620 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 NDUFV1P49821 464 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 MRE11P49959 708 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 FBXO47Q5MNV8 452 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 CYP2W1Q8TAV3 490 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 PCYT2Q99447 389 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 EHMT1Q9H9B1 1298 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 LY9Q9HBG7 655 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 SEC63Q9UGP8 760 aaKnown RBP11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 TUBE1Q9UJT0 475 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 TRPC6Q9Y210 931 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 MUC6Q6W4X9 2439 aa11.61□□□□□ -0.55
SCAMP3-205ENST00000472397 FRMPD4Q14CM0 1322 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 ATG2AQ2TAZ0 1938 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 STXBP3O00186 592 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 ITGB1P05556 798 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 INSRRP14616 1297 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 SP100P23497 879 aaPredicted RBP11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 NRIP1P48552 1158 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 MRPS6P82932 125 aaKnown RBP11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 CAMK1Q14012 370 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 SART3Q15020 963 aaKnown RBP11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 SPOUT1Q5T280 376 aaKnown RBP11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 HEATR3Q7Z4Q2 680 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 SKAP1Q86WV1 359 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 RNF135Q8IUD6 432 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 ADHFE1Q8IWW8 467 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 SAMD3Q8N6K7 520 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 KLHL23Q8NBE8 558 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 APBB2Q92870 758 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 C11orf84Q9BUA3 381 aaPredicted RBP11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 CDHR5Q9HBB8 845 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 BARX2Q9UMQ3 279 aaPredicted RBP11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 PCDHA6Q9UN73 950 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 PLAGL2Q9UPG8 496 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 PCDHA8Q9Y5H6 950 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
SCAMP3-205ENST00000472397 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 CAND2O75155 1236 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 DGKIO75912 1065 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 ARP10275 920 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 NHLH1Q02575 133 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 MTMR1Q13613 665 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 PLCB4Q15147 1175 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 IER5LQ5T953 404 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 RSPH3Q86UC2 560 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 MICAL1Q8TDZ2 1067 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 POF1BQ8WVV4 589 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 RPGRIP1Q96KN7 1286 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 TCEANC2Q96MN5 208 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 CD207Q9UJ71 328 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 UBIAD1Q9Y5Z9 338 aa11.59□□□□□ -0.55
SCAMP3-205ENST00000472397 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 MGEA5O60502 916 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 STAM2O75886 525 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 NT5C2P49902 561 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 APOBRQ0VD83 1088 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 TRAF1Q13077 416 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 ADAM15Q13444 863 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 SPPL3Q8TCT6 385 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 RUFY2Q8WXA3 655 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 ZNF689Q96CS4 500 aaPredicted RBP11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 SPZ1Q9BXG8 430 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 TMX1Q9H3N1 280 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 SMARCAD1Q9H4L7 1026 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 RC3H2Q9HBD1 1191 aaKnown RBP11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 FAM86C1Q9NVL1 165 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 ERAP1Q9NZ08 941 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 CLEC1BQ9P126 229 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 LRFN2Q9ULH4 789 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 PADI3Q9ULW8 664 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 FAM50BQ9Y247 325 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 TRPV2Q9Y5S1 764 aa11.58□□□□□ -0.56
SCAMP3-205ENST00000472397 KAT6AQ92794 2004 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 COL4A6Q14031 1691 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 SPDYE3A6NKU9 549 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 C5orf67F2Z3F1 127 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 SGSM2O43147 1006 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 MMP1P03956 469 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 RB1P06400 928 aa11.57□□□□□ -0.56
SCAMP3-205ENST00000472397 SMAD2Q15796 467 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms