RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-204ENST00000471812 MARK3P27448 753 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 HOXC8P31273 242 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 SREBF1P36956 1147 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 FOSBP53539 338 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 RABGGTBP53611 331 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 TRAF1Q13077 416 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 ME3Q16798 604 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 METTL7BQ6UX53 244 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 SESTD1Q86VW0 696 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 IL17RAQ96F46 866 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 MXRA8Q9BRK3 442 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 JADE2Q9NQC1 790 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 KCNH7Q9NS40 1196 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 SETD4Q9NVD3 440 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 MTMR10Q9NXD2 777 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 KCNJ14Q9UNX9 436 aa10.79□□□□□ -0.68
GGPS1-204ENST00000471812 YBX2Q9Y2T7 364 aaKnown RBP10.79□□□□□ -0.68
GGPS1-204ENST00000471812 H3BRB1 525 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 DHX15O43143 795 aaKnown RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 KPNA6O60684 536 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 NBNO60934 754 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 PPFIA4O75335 1185 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 TGFB3P10600 412 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 FDPSP14324 419 aaKnown RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 TCF7P36402 384 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 PPIGQ13427 754 aaKnown RBP eCLIP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 MTMR1Q13613 665 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 GNPTABQ3T906 1256 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 ZNF618Q5T7W0 954 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 RUFY4Q6ZNE9 571 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 TRAPPC12Q8WVT3 735 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 LENG9Q96B70 501 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 GPRASP2Q96D09 838 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 ZNF274Q96GC6 653 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 RNF26Q9BY78 433 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 TUT1Q9H6E5 874 aaKnown RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 AGO4Q9HCK5 861 aaKnown RBP10.78□□□□□ -0.68
GGPS1-204ENST00000471812 REV3LO60673 3130 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
GGPS1-204ENST00000471812 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 M0R2N6 131 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 MEIS1O00470 390 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 NOP56O00567 594 aaKnown RBP10.77□□□□□ -0.69
GGPS1-204ENST00000471812 JAK2O60674 1132 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 PFKFB2O60825 505 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 STAM2O75886 525 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 CKBP12277 381 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 ADAM17P78536 824 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 PTPN11Q06124 597 aaPredicted RBP10.77□□□□□ -0.69
GGPS1-204ENST00000471812 NEDD9Q14511 834 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 CEP55Q53EZ4 464 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
GGPS1-204ENST00000471812 XRRA1Q6P2D8 792 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 KCNV1Q6PIU1 500 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 NLRX1Q86UT6 975 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 C7orf31Q8N865 590 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 LMBR1Q8WVP7 490 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 HERVK_113Q902F9 699 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 EPAS1Q99814 870 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 PBX4Q9BYU1 374 aa10.77□□□□□ -0.69
GGPS1-204ENST00000471812 CCDC196A0A1B0GTZ2 297 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 WNT7AO00755 349 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 TDP2O95551 362 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 CTSHP09668 335 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 ATP4AP20648 1035 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 ACTR2P61160 394 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 DEFB103AP81534 67 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 SSRP1Q08945 709 aaKnown RBP10.76□□□□□ -0.69
GGPS1-204ENST00000471812 AMHR2Q16671 573 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 MARCH8Q5T0T0 291 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 PLA2G4DQ86XP0 818 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 REXO1Q8N1G1 1221 aaKnown RBP10.76□□□□□ -0.69
GGPS1-204ENST00000471812 SEMA6BQ9H3T3 888 aa10.76□□□□□ -0.69
GGPS1-204ENST00000471812 SPTBN5Q9NRC6 3674 aaKnown RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 hCG_1984214I3L0E3 225 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 LGR5O75473 907 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 FGBP02675 491 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 CYP3A4P08684 503 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 SUPT20HL2P0C7V6 817 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 DNAJB2P25686 324 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 NEK4P51957 841 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 ANAPC15P60006 121 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 AP3B2Q13367 1082 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 GRIN2CQ14957 1233 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 TSR1Q2NL82 804 aaKnown RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 PSRC1Q6PGN9 363 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 LRRC8DQ7L1W4 858 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 SERINC5Q86VE9 423 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 CCDC60Q8IWA6 550 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 ZNF713Q8N859 430 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 MYLIPQ8WY64 445 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms