RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 STAT5BP51692 787 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 FAM160B1Q5W0V3 765 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 PLPPR4Q7Z2D5 763 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 NOC4LQ9BVI4 516 aaKnown RBP22.3■■□□□ 1.16
HDAC7-220ENST00000471235 PPP1R12CQ9BZL4 782 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 NOL7Q9UMY1 257 aaKnown RBP22.3■■□□□ 1.16
HDAC7-220ENST00000471235 NOD1Q9Y239 953 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 PCDHA10Q9Y5I2 948 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 UMODL1Q5DID0 1318 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 C17orf102A2RUQ5 167 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 PSAPP07602 524 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 JAK3P52333 1124 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 ZNF200P98182 395 aaPredicted RBP22.29■■□□□ 1.16
HDAC7-220ENST00000471235 MDM2Q00987 491 aaPredicted RBP22.29■■□□□ 1.16
HDAC7-220ENST00000471235 CALCRLQ16602 461 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 TTC38Q5R3I4 469 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 LMBR1Q8WVP7 490 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 DHX38Q92620 1227 aaKnown RBP22.29■■□□□ 1.16
HDAC7-220ENST00000471235 BADQ92934 168 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 GDF15Q99988 308 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 HIPK3Q9H422 1215 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 ZNF302Q9NR11 478 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 DISC1Q9NRI5 854 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 SAMM50Q9Y512 469 aa22.29■■□□□ 1.16
HDAC7-220ENST00000471235 TIMP1P01033 207 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 SFNP31947 248 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 MCM7P33993 719 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 TRAPPC10P48553 1259 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 PPP2R5CQ13362 524 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 NBR1Q14596 966 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 PLCB4Q15147 1175 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 SWSAP1Q6NVH7 229 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 CHRDL2Q6WN34 429 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 MIER3Q7Z3K6 550 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 SLFN12Q8IYM2 578 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 RDM1Q8NG50 284 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 LBHD1Q9BQE6 289 aaPredicted RBP22.28■■□□□ 1.16
HDAC7-220ENST00000471235 TMEM60Q9H2L4 133 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 TET1Q8NFU7 2136 aa22.28■■□□□ 1.16
HDAC7-220ENST00000471235 VPS37CA5D8V6 355 aaPredicted RBP22.27■■□□□ 1.16
HDAC7-220ENST00000471235 MARCH6O60337 910 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 PDCP20941 246 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 CYP2C18P33260 490 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 SLC26A2P50443 739 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 TOB1P50616 345 aaPredicted RBP22.27■■□□□ 1.16
HDAC7-220ENST00000471235 PPFIA1Q13136 1202 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 ORC2Q13416 577 aaPredicted RBP22.27■■□□□ 1.16
HDAC7-220ENST00000471235 ZNF174Q15697 407 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 UGCGQ16739 394 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 PDXDC2PQ6P474 469 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 PRO3102Q9H379 93 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 SETD4Q9NVD3 440 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 GABBR1Q9UBS5 961 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 TRPC6Q9Y210 931 aa22.27■■□□□ 1.16
HDAC7-220ENST00000471235 EML1O00423 815 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 BAG4O95429 457 aaKnown RBP22.26■■□□□ 1.15
HDAC7-220ENST00000471235 ATP4AP20648 1035 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 ADAM17P78536 824 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 SPIRE1Q08AE8 756 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 GRIK4Q16099 956 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 ATP6V0A1Q93050 837 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 WNT8BQ93098 351 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 MTMR9Q96QG7 549 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 WNT8AQ9H1J5 351 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 MAFBQ9Y5Q3 323 aaPredicted RBP22.26■■□□□ 1.15
HDAC7-220ENST00000471235 NRCAMQ92823 1304 aa22.26■■□□□ 1.15
HDAC7-220ENST00000471235 TREHO43280 583 aa22.25■■□□□ 1.15
HDAC7-220ENST00000471235 SYT1P21579 422 aa22.25■■□□□ 1.15
HDAC7-220ENST00000471235 PTK7Q13308 1070 aa22.25■■□□□ 1.15
HDAC7-220ENST00000471235 TRIM71Q2Q1W2 868 aaKnown RBP22.25■■□□□ 1.15
HDAC7-220ENST00000471235 MFSD5Q6N075 450 aa22.25■■□□□ 1.15
HDAC7-220ENST00000471235 SERINC5Q86VE9 423 aa22.25■■□□□ 1.15
HDAC7-220ENST00000471235 ATP8B4Q8TF62 1192 aa22.25■■□□□ 1.15
HDAC7-220ENST00000471235 POTEB3A0JP26 581 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 ZNF862O60290 1169 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 GNAT1P11488 350 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 INSRRP14616 1297 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 RBL2Q08999 1139 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 NCAPH2Q6IBW4 605 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 POTEBQ6S5H4 581 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 CCDC155Q8N6L0 562 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 PCDHB6Q9Y5E3 794 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 GBF1Q92538 1859 aa22.24■■□□□ 1.15
HDAC7-220ENST00000471235 PITPNM1O00562 1244 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 OR52Z1P0C646 297 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 TXKP42681 527 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 CCL23P55773 120 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 IGBP1P78318 339 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 PRKCEQ02156 737 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 FPGSQ05932 587 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 BFSP2Q13515 415 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 CAGE1Q8TC20 777 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 TRAPPC12Q8WVT3 735 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 TTC12Q9H892 705 aaPredicted RBP22.23■■□□□ 1.15
HDAC7-220ENST00000471235 COLQQ9Y215 455 aaPredicted RBP22.23■■□□□ 1.15
HDAC7-220ENST00000471235 PTPRSQ13332 1948 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 COL1A2P08123 1366 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 MICAL3Q7RTP6 2002 aa22.23■■□□□ 1.15
HDAC7-220ENST00000471235 MBLAC1A4D2B0 266 aaPredicted RBP22.22■■□□□ 1.15
HDAC7-220ENST00000471235 HBP1O60381 514 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms