RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 EMSYQ7Z589 1322 aa13.03□□□□□ -0.32
FN1-217ENST00000471193 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.33
FN1-217ENST00000471193 NR1I2O75469 434 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 LGR5O75473 907 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 SLITRK3O94933 977 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 MMP3P08254 477 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.33
FN1-217ENST00000471193 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.33
FN1-217ENST00000471193 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 POTEGQ6S5H5 508 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 KCTD17Q8N5Z5 321 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 PDILTQ8N807 584 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 BANK1Q8NDB2 785 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 AFAP1L1Q8TED9 768 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 LRRC15Q8TF66 581 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 SEPT1Q8WYJ6 367 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 CDK5RAP3Q96JB5 506 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 PCYT2Q99447 389 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
FN1-217ENST00000471193 DACT1Q9NYF0 836 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 WRAP73Q9P2S5 460 aaPredicted RBP13.02□□□□□ -0.33
FN1-217ENST00000471193 SYNRGQ9UMZ2 1314 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 FRMPD3Q5JV73 1810 aa13.02□□□□□ -0.33
FN1-217ENST00000471193 A6NJR5 290 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 LYPLA2O95372 231 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 RARBP10826 455 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 CNGA1P29973 690 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 STAT6P42226 847 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 QARSP47897 775 aaKnown RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 GJA9P57773 515 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 PSMC5P62195 406 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 NKX3-2P78367 333 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 SLC9C1Q4G0N8 1177 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 RRAGBQ5VZM2 374 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 FBXO46Q6PJ61 603 aaPredicted RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 ATP6V0A1Q93050 837 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 DHX58Q96C10 678 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 ZSWIM4Q9H7M6 989 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 BLOC1S4Q9NUP1 217 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 DDX19AQ9NUU7 478 aaKnown RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 GABBR1Q9UBS5 961 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
FN1-217ENST00000471193 MAFBQ9Y5Q3 323 aaPredicted RBP13.01□□□□□ -0.33
FN1-217ENST00000471193 BACH1O14867 736 aa13□□□□□ -0.33
FN1-217ENST00000471193 CTAGE5O15320 804 aa13□□□□□ -0.33
FN1-217ENST00000471193 ZNF862O60290 1169 aa13□□□□□ -0.33
FN1-217ENST00000471193 MSCO60682 206 aa13□□□□□ -0.33
FN1-217ENST00000471193 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.332e-85■□□□□ 8.9
FN1-217ENST00000471193 KINO60870 393 aaKnown RBP13□□□□□ -0.33
FN1-217ENST00000471193 ADAMTS4O75173 837 aa13□□□□□ -0.33
FN1-217ENST00000471193 ZNF202O95125 648 aa13□□□□□ -0.33
FN1-217ENST00000471193 LGALS2P05162 132 aa13□□□□□ -0.33
FN1-217ENST00000471193 CPT1AP50416 773 aa13□□□□□ -0.33
FN1-217ENST00000471193 PKN2Q16513 984 aaKnown RBP13□□□□□ -0.33
FN1-217ENST00000471193 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
FN1-217ENST00000471193 FAM160B1Q5W0V3 765 aa13□□□□□ -0.33
FN1-217ENST00000471193 SWSAP1Q6NVH7 229 aa13□□□□□ -0.33
FN1-217ENST00000471193 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
FN1-217ENST00000471193 TPH2Q8IWU9 490 aa13□□□□□ -0.33
FN1-217ENST00000471193 C4orf19Q8IY42 314 aa13□□□□□ -0.33
FN1-217ENST00000471193 IQUBQ8NA54 791 aa13□□□□□ -0.33
FN1-217ENST00000471193 RAD54LQ92698 747 aa13□□□□□ -0.33
FN1-217ENST00000471193 TIGD1Q96MW7 591 aa13□□□□□ -0.33
FN1-217ENST00000471193 PLIN2Q99541 437 aa13□□□□□ -0.33
FN1-217ENST00000471193 PANK2Q9BZ23 570 aa13□□□□□ -0.33
FN1-217ENST00000471193 XRN2Q9H0D6 950 aaKnown RBP eCLIP13□□□□□ -0.33
FN1-217ENST00000471193 AP5M1Q9H0R1 490 aa13□□□□□ -0.33
FN1-217ENST00000471193 CUEDC2Q9H467 287 aa13□□□□□ -0.33
FN1-217ENST00000471193 MAGEF1Q9HAY2 307 aa13□□□□□ -0.33
FN1-217ENST00000471193 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
FN1-217ENST00000471193 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
FN1-217ENST00000471193 KIAA1024Q9UPX6 916 aa13□□□□□ -0.33
FN1-217ENST00000471193 E9PMD0 336 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 PRKCEQ02156 737 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
FN1-217ENST00000471193 DGKDQ16760 1214 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 LONRF3Q496Y0 759 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
FN1-217ENST00000471193 TRIM50Q86XT4 487 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 LARP4BQ92615 738 aaKnown RBP12.99□□□□□ -0.33
FN1-217ENST00000471193 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 AZI2Q9H6S1 392 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 XPNPEP3Q9NQH7 507 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
FN1-217ENST00000471193 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
FN1-217ENST00000471193 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
FN1-217ENST00000471193 TRAK2O60296 914 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms