RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 PRDM13Q9H4Q3 707 aa5.06□□□□□ -1.6
CLIP4-209ENST00000471165 ARNTLO00327 626 aa5.05□□□□□ -1.6
CLIP4-209ENST00000471165 SORBS3O60504 671 aa5.05□□□□□ -1.6
CLIP4-209ENST00000471165 ENO2P09104 434 aaPredicted RBP5.05□□□□□ -1.6
CLIP4-209ENST00000471165 TRIM48Q8IWZ4 208 aa5.05□□□□□ -1.6
CLIP4-209ENST00000471165 CLEC4DQ8WXI8 215 aa5.05□□□□□ -1.6
CLIP4-209ENST00000471165 TOR3AQ9H497 397 aa5.05□□□□□ -1.6
CLIP4-209ENST00000471165 RNF7Q9UBF6 113 aa5.05□□□□□ -1.6
CLIP4-209ENST00000471165 TRAF5O00463 557 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 MAFKO60675 156 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 BRD1O95696 1058 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 ETV4P43268 484 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 CYP4F3Q08477 520 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 HECTD2Q5U5R9 776 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 Q6ZRM9 215 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 HDGFL2Q7Z4V5 671 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-209ENST00000471165 ZNF513Q8N8E2 541 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-209ENST00000471165 MICAL1Q8TDZ2 1067 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 SLC25A43Q8WUT9 341 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-209ENST00000471165 DIO2Q92813 273 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 KIAA1683Q9H0B3 1180 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 EPB41L1Q9H4G0 881 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 VTI1BQ9UEU0 232 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 EMC9Q9Y3B6 208 aa5.04□□□□□ -1.6
CLIP4-209ENST00000471165 FAHP16930 419 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 HOXB6P17509 224 aaKnown RBP5.03□□□□□ -1.6
CLIP4-209ENST00000471165 CNGB1Q14028 1251 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-209ENST00000471165 E4F1Q66K89 784 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-209ENST00000471165 CYP4F22Q6NT55 531 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 ZNF366Q8N895 744 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 RBBP8NLQ8NC74 664 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-209ENST00000471165 FERD3LQ96RJ6 166 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 KRTAP4-4Q9BYR3 166 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 CYP26B1Q9NR63 512 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 TESQ9UGI8 421 aaKnown RBP5.03□□□□□ -1.6
CLIP4-209ENST00000471165 PCDHB10Q9UN67 800 aa5.03□□□□□ -1.6
CLIP4-209ENST00000471165 SPATA31A6Q5VVP1 1343 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 MYADML2A6NDP7 307 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 ZNF839A8K0R7 811 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 SLC27A2O14975 620 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 PTPAQ15257 358 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 CD276Q5ZPR3 534 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 ZNF662Q6ZS27 426 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 USP30Q70CQ3 517 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 RCBTB1Q8NDN9 531 aa5.02□□□□□ -1.61
CLIP4-209ENST00000471165 FAM20BO75063 409 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 SLC7A5Q01650 507 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 LSAMPQ13449 338 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 PAN2Q504Q3 1202 aaKnown RBP5.01□□□□□ -1.61
CLIP4-209ENST00000471165 LY6G5CQ5SRR4 150 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 FBXO42Q6P3S6 717 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 LARP4Q71RC2 724 aaKnown RBP eCLIP5.01□□□□□ -1.61
CLIP4-209ENST00000471165 PROKR1Q8TCW9 393 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 SMG7Q92540 1137 aaKnown RBP5.01□□□□□ -1.61
CLIP4-209ENST00000471165 CHAMP1Q96JM3 812 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 MPHOSPH9Q99550 1183 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 AGO3Q9H9G7 860 aaKnown RBP5.01□□□□□ -1.61
CLIP4-209ENST00000471165 CLDND1Q9NY35 253 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 APEX2Q9UBZ4 518 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 FRMD4BQ9Y2L6 1034 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 SH3BP1Q9Y3L3 701 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 COL4A3Q01955 1670 aa5.01□□□□□ -1.61
CLIP4-209ENST00000471165 ANKRD33BA6NCL7 494 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 B3GALT2O43825 422 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 KCNAB2Q13303 367 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 FBXW10Q5XX13 1052 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 GTF2IRD2BQ6EKJ0 949 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 GTF2IRD2Q86UP8 949 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 ANKRD35Q8N283 1001 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 Q8N9P0 234 aaPredicted RBP5□□□□□ -1.61
CLIP4-209ENST00000471165 BEND2Q8NDZ0 799 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 ZDHHC5Q9C0B5 715 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 PHAXQ9H814 394 aaKnown RBP5□□□□□ -1.61
CLIP4-209ENST00000471165 PCDHA2Q9Y5H9 948 aa5□□□□□ -1.61
CLIP4-209ENST00000471165 KRIT1O00522 736 aa4.99□□□□□ -1.61
CLIP4-209ENST00000471165 PRR16Q569H4 304 aa4.99□□□□□ -1.61
CLIP4-209ENST00000471165 SP5Q6BEB4 398 aaPredicted RBP4.99□□□□□ -1.61
CLIP4-209ENST00000471165 RBM12BQ8IXT5 1001 aaKnown RBP4.99□□□□□ -1.61
CLIP4-209ENST00000471165 SYNE4Q8N205 404 aa4.99□□□□□ -1.61
CLIP4-209ENST00000471165 SHCBP1Q8NEM2 672 aa4.99□□□□□ -1.61
CLIP4-209ENST00000471165 KLHL6Q8WZ60 621 aa4.99□□□□□ -1.61
CLIP4-209ENST00000471165 NKX2-4Q9H2Z4 354 aa4.99□□□□□ -1.61
CLIP4-209ENST00000471165 ABHD16AO95870 558 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 MAN2A2P49641 1150 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 POMZP3Q6PJE2 187 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 CRACR2BQ8N4Y2 399 aaPredicted RBP4.98□□□□□ -1.61
CLIP4-209ENST00000471165 ZNF276Q8N554 614 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 MRS2Q9HD23 443 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 GGT7Q9UJ14 662 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 IVNS1ABPQ9Y6Y0 642 aa4.98□□□□□ -1.61
CLIP4-209ENST00000471165 COL3A1P02461 1466 aaPredicted RBP4.98□□□□□ -1.61
CLIP4-209ENST00000471165 MEFVO15553 781 aaPredicted RBP4.97□□□□□ -1.61
CLIP4-209ENST00000471165 SLC26A4O43511 780 aa4.97□□□□□ -1.61
CLIP4-209ENST00000471165 HMGCRP04035 888 aa4.97□□□□□ -1.61
CLIP4-209ENST00000471165 KCNQ1P51787 676 aa4.97□□□□□ -1.61
CLIP4-209ENST00000471165 ZC3H7AQ8IWR0 971 aaKnown RBP4.97□□□□□ -1.61
CLIP4-209ENST00000471165 BVESQ8NE79 360 aa4.97□□□□□ -1.61
CLIP4-209ENST00000471165 SPATA3Q8NHX4 192 aa4.97□□□□□ -1.61
CLIP4-209ENST00000471165 PIP4K2CQ8TBX8 421 aa4.97□□□□□ -1.61
CLIP4-209ENST00000471165 THAP3Q8WTV1 239 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms