RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 C19orf81C9J6K1 198 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 ASNSP08243 561 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SNHG28P0DPA3 235 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 GRK4P32298 578 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 CDK8P49336 464 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SARSP49591 514 aaKnown RBP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SMTNP53814 917 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 CAP1Q01518 475 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 GABPAQ06546 454 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SPAG1Q07617 926 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 NPY5RQ15761 445 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 FAM110CQ1W6H9 321 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 WDR44Q5JSH3 913 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 GADL1Q6ZQY3 521 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 FCHSD1Q86WN1 690 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 PGBD3Q8N328 593 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SMCR8Q8TEV9 937 aaPredicted RBP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 GTF3C2Q8WUA4 911 aaPredicted RBP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 CCDC47Q96A33 483 aaKnown RBP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 NAP1L5Q96NT1 182 aaPredicted RBP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 CTAGE1Q96RT6 745 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 MAP7D2Q96T17 732 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 WDR18Q9BV38 432 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
HDAC8-216ENST00000470998 RAB34Q9BZG1 259 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 ZMYND12Q9H0C1 365 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 GJB4Q9NTQ9 266 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SERPINB13Q9UIV8 391 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 STX8Q9UNK0 236 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 KCNJ14Q9UNX9 436 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 DYRK1BQ9Y463 629 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 PCDHB6Q9Y5E3 794 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 MYPNQ86TC9 1320 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 IGKV6D-41A0A0C4DH26 115 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 A0A1B0GTH6 734 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 GOLGA6L9A6NEM1 432 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 TMEM229AB2RXF0 380 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 KLRF2D3W0D1 207 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 M0R2N6 131 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 STXBP3O00186 592 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 DYNC1I1O14576 645 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 POLR2DO15514 142 aaKnown RBP6.37□□□□□ -1.39
HDAC8-216ENST00000470998 DTNBO60941 627 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 TTLL1O95922 423 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 GJB1P08034 283 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 CYP2C8P10632 490 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 GCFC2P16383 781 aaKnown RBP6.37□□□□□ -1.39
HDAC8-216ENST00000470998 EN2P19622 333 aaPredicted RBP6.37□□□□□ -1.39
HDAC8-216ENST00000470998 RFX1P22670 979 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 SFPQP23246 707 aaKnown RBP eCLIP6.37□□□□□ -1.39
HDAC8-216ENST00000470998 PLA2G4AP47712 749 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 PLCD1P51178 756 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 SPP2Q13103 211 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 MORC3Q14149 939 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 FAM47AQ5JRC9 791 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 FOXR1Q6PIV2 292 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 SV2AQ7L0J3 742 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 CCDC186Q7Z3E2 898 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 MAPKAPK5Q8IW41 473 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 ANKRD20A12PQ8NF67 263 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 COA7Q96BR5 231 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 ARHGAP39Q9C0H5 1083 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 CCSER1Q9C0I3 900 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 LRRC27Q9C0I9 530 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 IL17RBQ9NRM6 502 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 ZNF358Q9NW07 568 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 MTMR4Q9NYA4 1195 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 TMOD4Q9NZQ9 345 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 MAD2L2Q9UI95 211 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 PCDHA5Q9Y5H7 936 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 MYH13Q9UKX3 1938 aa6.37□□□□□ -1.39
HDAC8-216ENST00000470998 A6NJY4 79 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 TNPO2O14787 897 aaKnown RBP6.36□□□□□ -1.39
HDAC8-216ENST00000470998 AP5Z1O43299 807 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 CYP2D6P10635 497 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 PTGS1P23219 599 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 CTGFP29279 349 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
HDAC8-216ENST00000470998 GJA8P48165 433 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 NAPAP54920 295 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 BACE1P56817 501 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 CLDN10P78369 228 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 AMPD3Q01432 767 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 PRKCZQ05513 592 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 STIM1Q13586 685 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 TRIM14Q14142 442 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 KCNB1Q14721 858 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 NCAPHQ15003 741 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 NONOQ15233 471 aaKnown RBP eCLIP6.36□□□□□ -1.39
HDAC8-216ENST00000470998 LONRF3Q496Y0 759 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 C4orf17Q53FE4 359 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 DNTTIP2Q5QJE6 756 aaKnown RBP6.36□□□□□ -1.39
HDAC8-216ENST00000470998 FOXR2Q6PJQ5 311 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 DTHD1Q6ZMT9 781 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 PIK3AP1Q6ZUJ8 805 aa6.36□□□□□ -1.39
HDAC8-216ENST00000470998 NEK8Q86SG6 692 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms