RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 ATG7O95352 703 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 CTSHP09668 335 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 ATP2A2P16615 1042 aaKnown RBP17.8■□□□□ 0.44
HDAC6-218ENST00000470942 ADAM17P78536 824 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 RAB30Q15771 203 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 FAM160B1Q5W0V3 765 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 ABHD15Q6UXT9 468 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 PLPPR4Q7Z2D5 763 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
HDAC6-218ENST00000470942 GUCD1Q96NT3 240 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 PHF20Q9BVI0 1012 aa17.8■□□□□ 0.44
HDAC6-218ENST00000470942 WDR81Q562E7 1941 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 M0R2N6 131 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 CXCL10P02778 98 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 INSRRP14616 1297 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 KCNJ6P48051 423 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 RABGGTBP53611 331 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 PLCB4Q15147 1175 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 NONOQ15233 471 aaKnown RBP eCLIP17.79■□□□□ 0.44
HDAC6-218ENST00000470942 NPY5RQ15761 445 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 MIS18BP1Q6P0N0 1132 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 CNKSR3Q6P9H4 555 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 KRT25Q7Z3Z0 450 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 ZNF302Q9NR11 478 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 TUBE1Q9UJT0 475 aa17.79■□□□□ 0.44
HDAC6-218ENST00000470942 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 POTEB3A0JP26 581 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 RRN3P2A6NIE6 340 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 MSH4O15457 936 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 EDIL3O43854 480 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 CAND2O75155 1236 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 KRT76Q01546 638 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 MBTPS1Q14703 1052 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 INF2Q27J81 1249 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 ZNF746Q6NUN9 644 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-218ENST00000470942 SWSAP1Q6NVH7 229 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 TAF2Q6P1X5 1199 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 POTEBQ6S5H4 581 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 RUFY4Q6ZNE9 571 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 RSPH3Q86UC2 560 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
HDAC6-218ENST00000470942 LENG9Q96B70 501 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 SLC9A7Q96T83 725 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-218ENST00000470942 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 LIMCH1Q9UPQ0 1083 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 STXBP5LQ9Y2K9 1186 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
HDAC6-218ENST00000470942 IGKV6D-21A0A0A0MT36 114 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 RBAK-RBAKDNI3L0D1 243 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 TDP2O95551 362 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 FDPSP14324 419 aaKnown RBP17.77■□□□□ 0.44
HDAC6-218ENST00000470942 SLC26A2P50443 739 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 IKBKEQ14164 716 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
HDAC6-218ENST00000470942 CCDC60Q8IWA6 550 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-218ENST00000470942 YBX2Q9Y2T7 364 aaKnown RBP17.77■□□□□ 0.44
HDAC6-218ENST00000470942 MYO9BQ13459 2157 aa17.77■□□□□ 0.43
HDAC6-218ENST00000470942 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 JAK2O60674 1132 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 GAS7O60861 476 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 PSAPP07602 524 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 MYOGP15173 224 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 FOSBP53539 338 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 WDR5P61964 334 aaKnown RBP17.76■□□□□ 0.43
HDAC6-218ENST00000470942 TCTN1Q2MV58 587 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 Q4G0T1 1027 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 CKAP2LQ8IYA6 745 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 SMAP1Q8IYB5 467 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-218ENST00000470942 DBF4BQ8NFT6 615 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 PHOSPHO2Q8TCD6 241 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 TRAPPC12Q8WVT3 735 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 MYLIPQ8WY64 445 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 ZBTB10Q96DT7 871 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 TEKT3Q9BXF9 490 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 SLC28A3Q9HAS3 691 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 PCDHA11Q9Y5I1 949 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
HDAC6-218ENST00000470942 CYP3A7-CYP3A51PA0A087WV96 503 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 ABHD14A-ACY1A0A1B0GW23 586 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 MBLAC1A4D2B0 266 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-218ENST00000470942 KIF28PB7ZC32 967 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 CHMP2AO43633 222 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 HBP1O60381 514 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 EFCAB14O75071 495 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 CYP3A7P24462 503 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 KRT2P35908 639 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 LETM2Q2VYF4 491 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 LRCH2Q5VUJ6 765 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 PIK3AP1Q6ZUJ8 805 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 TRMT1LQ7Z2T5 733 aaKnown RBP17.75■□□□□ 0.43
HDAC6-218ENST00000470942 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 ATP8B4Q8TF62 1192 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms