RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 IL17RAQ96F46 866 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 FBXL18Q96ME1 805 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 SPATA33Q96N06 139 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 TAAR1Q96RJ0 339 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 CTAGE1Q96RT6 745 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 C11orf84Q9BUA3 381 aaPredicted RBP10.29□□□□□ -0.76
XRN1-208ENST00000470537 IRF2BPLQ9H1B7 796 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 MLXIPQ9HAP2 919 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 CLDND1Q9NY35 253 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 WDFY4Q6ZS81 3184 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 SIP14410 1827 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 C17orf102A2RUQ5 167 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 H3BRB1 525 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 COL19A1Q14993 1142 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 CDC37Q16543 378 aaPredicted RBP10.28□□□□□ -0.76
XRN1-208ENST00000470537 TRIM71Q2Q1W2 868 aaKnown RBP10.28□□□□□ -0.76
XRN1-208ENST00000470537 TCEAL5Q5H9L2 206 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
XRN1-208ENST00000470537 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
XRN1-208ENST00000470537 RASGRP2Q7LDG7 609 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 FIBCD1Q8N539 461 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 MRGPRX2Q96LB1 330 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 USB1Q9BQ65 265 aaKnown RBP10.28□□□□□ -0.76
XRN1-208ENST00000470537 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
XRN1-208ENST00000470537 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
XRN1-208ENST00000470537 KAT14Q9H8E8 782 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 LCTP09848 1927 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 ZMYM6O95789 1325 aa10.28□□□□□ -0.76
XRN1-208ENST00000470537 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
XRN1-208ENST00000470537 ZNF213O14771 459 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 KDM4AO75164 1064 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 UPP2O95045 317 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 CFBP00751 764 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
XRN1-208ENST00000470537 CD46P15529 392 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 EIF2AK2P19525 551 aaKnown RBP10.27□□□□□ -0.77
XRN1-208ENST00000470537 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.77
XRN1-208ENST00000470537 HERC4Q5GLZ8 1057 aaPredicted RBP10.27□□□□□ -0.77
XRN1-208ENST00000470537 BMP8AQ7Z5Y6 402 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 ADGRF4Q8IZF3 695 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 PNMA1Q8ND90 353 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 AMNQ9BXJ7 453 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 UBA5Q9GZZ9 404 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 PXMP2Q9NR77 195 aa10.27□□□□□ -0.77
XRN1-208ENST00000470537 COL4A4P53420 1690 aaPredicted RBP10.27□□□□□ -0.77
XRN1-208ENST00000470537 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 J3QL48 77 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 FOXP2O15409 715 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 STAM2O75886 525 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 RPLP2P05387 115 aaKnown RBP10.26□□□□□ -0.77
XRN1-208ENST00000470537 PARP1P09874 1014 aaKnown RBP10.26□□□□□ -0.77
XRN1-208ENST00000470537 ZNF286BP0CG31 522 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 GOLGA8HP0CJ92 632 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 MBTPS1Q14703 1052 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 GNPTABQ3T906 1256 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 VPS53Q5VIR6 699 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 STOX1Q6ZVD7 989 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 RSPH3Q86UC2 560 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 SUGP1Q8IWZ8 645 aaKnown RBP10.26□□□□□ -0.77
XRN1-208ENST00000470537 EDAQ92838 391 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 REPIN1Q9BWE0 567 aaKnown RBP10.26□□□□□ -0.77
XRN1-208ENST00000470537 PLVAPQ9BX97 442 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
XRN1-208ENST00000470537 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
XRN1-208ENST00000470537 TRIOO75962 3097 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 KIAA1217Q5T5P2 1943 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 MICAL3Q7RTP6 2002 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 FSD2A1L4K1 749 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
XRN1-208ENST00000470537 GGPS1O95749 300 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 MYCLP12524 364 aaPredicted RBP10.25□□□□□ -0.77
XRN1-208ENST00000470537 CCND2P30279 289 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 CTNNB1P35222 781 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 IRS1P35568 1242 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 BMPR1AP36894 532 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 HSD17B4P51659 736 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 ZNF200P98182 395 aaPredicted RBP10.25□□□□□ -0.77
XRN1-208ENST00000470537 PLCB2Q00722 1185 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
XRN1-208ENST00000470537 SMAD4Q13485 552 aaKnown RBP10.25□□□□□ -0.77
XRN1-208ENST00000470537 NEDD9Q14511 834 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 QRICH1Q2TAL8 776 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 HSDL1Q3SXM5 330 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 NAALADL2Q58DX5 795 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
XRN1-208ENST00000470537 HFE2Q6ZVN8 426 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 VSIG10LQ86VR7 867 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 ANKS1AQ92625 1134 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 SNX27Q96L92 541 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 C16orf70Q9BSU1 422 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 VAT1LQ9HCJ6 419 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 CCDC171Q6TFL3 1326 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 PTPRSQ13332 1948 aa10.25□□□□□ -0.77
XRN1-208ENST00000470537 STXBP3O00186 592 aa10.24□□□□□ -0.77
XRN1-208ENST00000470537 SMIM10L2AP0DMW4 78 aa10.24□□□□□ -0.77
XRN1-208ENST00000470537 SMIM10L2BP0DMW5 78 aa10.24□□□□□ -0.77
XRN1-208ENST00000470537 HAND2P61296 217 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms