RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 MICAL1Q8TDZ2 1067 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 POF1BQ8WVV4 589 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 DNAJB3Q8WWF6 145 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 CLP1Q92989 425 aaKnown RBP10.56□□□□□ -0.72
CCDC171-204ENST00000470191 ZNF689Q96CS4 500 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-204ENST00000470191 PIGSQ96S52 555 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 UBAC1Q9BSL1 405 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
CCDC171-204ENST00000470191 TLR9Q9NR96 1032 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
CCDC171-204ENST00000470191 FNDC1Q4ZHG4 1894 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-204ENST00000470191 DGKIO75912 1065 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 EYA4O95677 639 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 GLP2RO95838 553 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 PDGFBP01127 241 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-204ENST00000470191 C7P10643 843 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 CD52P31358 61 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
CCDC171-204ENST00000470191 ADAM17P78536 824 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 TMEM62Q0P6H9 643 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 NEDD9Q14511 834 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 FBXO47Q5MNV8 452 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 SPOUT1Q5T280 376 aaKnown RBP10.55□□□□□ -0.72
CCDC171-204ENST00000470191 EFHBQ8N7U6 833 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 SMRP1Q8NCR6 262 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 LINC01599Q8WXQ3 324 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 PRRX2Q99811 253 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 PLVAPQ9BX97 442 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 FAM49AQ9H0Q0 323 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-204ENST00000470191 TLE6Q9H808 572 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 EHMT1Q9H9B1 1298 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 PKD2L1Q9P0L9 805 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 MAD2L2Q9UI95 211 aa10.55□□□□□ -0.72
CCDC171-204ENST00000470191 USP34Q70CQ2 3546 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 SPATA31C2B4DYI2 1134 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 SDSP20132 328 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 AVPR2P30518 371 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 TCF7P36402 384 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-204ENST00000470191 SIGLEC14Q08ET2 396 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 MGAT3Q09327 533 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 PPFIA1Q13136 1202 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 CWC27Q6UX04 472 aaKnown RBP10.54□□□□□ -0.72
CCDC171-204ENST00000470191 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 RSPH3Q86UC2 560 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 P2RX5Q93086 422 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 PHF7Q9BWX1 381 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-204ENST00000470191 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
CCDC171-204ENST00000470191 MAP3K20Q9NYL2 800 aaKnown RBP10.54□□□□□ -0.72
CCDC171-204ENST00000470191 TUBE1Q9UJT0 475 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 LRFN2Q9ULH4 789 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 NRCAMQ92823 1304 aa10.54□□□□□ -0.72
CCDC171-204ENST00000470191 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 FIBPO43427 364 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 MRPS6P82932 125 aaKnown RBP10.53□□□□□ -0.72
CCDC171-204ENST00000470191 GHRHRQ02643 423 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 COASYQ13057 564 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 GRIK4Q16099 956 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 PKN1Q16512 942 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
CCDC171-204ENST00000470191 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 TSHZ1Q6ZSZ6 1077 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 CYB5R4Q7L1T6 521 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 RTN4RL1Q86UN2 441 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-204ENST00000470191 CMTR2Q8IYT2 770 aaKnown RBP10.53□□□□□ -0.72
CCDC171-204ENST00000470191 GLG1Q92896 1179 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 INPP4AQ96PE3 977 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-204ENST00000470191 KRT23Q9C075 422 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 LNPKQ9C0E8 428 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
CCDC171-204ENST00000470191 ICAM3P32942 547 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 CBX2Q14781 532 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-204ENST00000470191 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 TAF2Q6P1X5 1199 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 NPAS4Q8IUM7 802 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 SMARCC2Q8TAQ2 1214 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 TRAPPC12Q8WVT3 735 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 ASIC4Q96FT7 647 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 HCSTQ9UBK5 93 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 PADI3Q9ULW8 664 aa10.52□□□□□ -0.73
CCDC171-204ENST00000470191 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-204ENST00000470191 M0QZ92 97 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 ATP9AO75110 1047 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 STAG3L1P0CL83 205 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 SCG2P13521 617 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 TECP42680 631 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 ERVFC1P60507 584 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 APOBRQ0VD83 1088 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 PAK2Q13177 524 aa10.51□□□□□ -0.73
CCDC171-204ENST00000470191 SEC23AQ15436 765 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms