RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 ADAM29Q9UKF5 820 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 CRTAMO95727 393 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 JAM2P57087 298 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 PPP2CBP62714 309 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 PPP2CAP67775 309 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 ARHGEF18Q6ZSZ5 1173 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 Q6ZUG5 572 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 NLGN4XQ8N0W4 816 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 KISS1RQ969F8 398 aaPredicted RBP8.2□□□□□ -1.1
COL11A1-208ENST00000470170 DNAJC7Q99615 494 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 PTPN18Q99952 460 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
COL11A1-208ENST00000470170 NPEPPSL1A6NEC2 478 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 KCNK3O14649 394 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 CHGBP05060 677 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 EPHB4P54760 987 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 ST5P78524 1137 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 DBPQ10586 325 aaPredicted RBP8.19□□□□□ -1.1
COL11A1-208ENST00000470170 PUM1Q14671 1186 aaKnown RBP eCLIP8.19□□□□□ -1.1
COL11A1-208ENST00000470170 LONRF2Q1L5Z9 754 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 C16orf59Q7L2K0 433 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 GPR155Q7Z3F1 870 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 LRP10Q7Z4F1 713 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 ZC3H7AQ8IWR0 971 aaKnown RBP8.19□□□□□ -1.1
COL11A1-208ENST00000470170 TTC9BQ8N6N2 239 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 SRPK1Q96SB4 655 aaKnown RBP8.19□□□□□ -1.1
COL11A1-208ENST00000470170 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 JADE2Q9NQC1 790 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 NDOR1Q9UHB4 597 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 ATP23Q9Y6H3 246 aa8.19□□□□□ -1.1
COL11A1-208ENST00000470170 CCDC66A2RUB6 948 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 ZNF20P17024 532 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 NAT1P18440 290 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 DNM2P50570 870 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 FIGNQ5HY92 759 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 RALYLQ86SE5 291 aaKnown RBP8.18□□□□□ -1.1
COL11A1-208ENST00000470170 CHST13Q8NET6 341 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 PMFBP1Q8TBY8 1022 aa8.18□□□□□ -1.1
COL11A1-208ENST00000470170 H0Y858 1186 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 GPR42O15529 346 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 ICAM4Q14773 271 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 CRY1Q16526 586 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 CPZQ66K79 652 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 EP400NLQ6ZTU2 488 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 SMURF1Q9HCE7 757 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 ARHGAP28Q9P2N2 729 aa8.17□□□□□ -1.1
COL11A1-208ENST00000470170 RASGRP1O95267 797 aa8.16□□□□□ -1.1
COL11A1-208ENST00000470170 CSF2RBP32927 897 aa8.16□□□□□ -1.1
COL11A1-208ENST00000470170 FAM47CQ5HY64 1035 aa8.16□□□□□ -1.1
COL11A1-208ENST00000470170 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
COL11A1-208ENST00000470170 CISD2Q8N5K1 135 aaKnown RBP8.16□□□□□ -1.1
COL11A1-208ENST00000470170 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
COL11A1-208ENST00000470170 MEGF9Q9H1U4 602 aa8.16□□□□□ -1.1
COL11A1-208ENST00000470170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.15□□□□□ -1.1
COL11A1-208ENST00000470170 PRAMEF25A6NGN4 478 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 SLFN13Q68D06 897 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 GSTCDQ8NEC7 633 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 SLC7A14Q8TBB6 771 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 C1QTNF3Q9BXJ4 246 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 MYRFQ9Y2G1 1151 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 PTPN22Q9Y2R2 807 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 COQ6Q9Y2Z9 468 aa8.15□□□□□ -1.1
COL11A1-208ENST00000470170 GSTA4O15217 222 aa8.14□□□□□ -1.11
COL11A1-208ENST00000470170 CNOT4O95628 575 aaKnown RBP8.14□□□□□ -1.11
COL11A1-208ENST00000470170 C4BPAP04003 597 aaKnown RBP8.14□□□□□ -1.11
COL11A1-208ENST00000470170 ZNF888P0CJ79 500 aaPredicted RBP8.14□□□□□ -1.11
COL11A1-208ENST00000470170 GJA4P35212 333 aa8.14□□□□□ -1.11
COL11A1-208ENST00000470170 ZC3H12BQ5HYM0 836 aaKnown RBP8.14□□□□□ -1.11
COL11A1-208ENST00000470170 KATNBL1Q9H079 304 aa8.14□□□□□ -1.11
COL11A1-208ENST00000470170 ESYT3A0FGR9 886 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 EFCAB14O75071 495 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 MC4RP32245 332 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 SEC23AQ15436 765 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 FSTL4Q6MZW2 842 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 REXO1L1PQ8IX06 675 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 DVL3Q92997 716 aaPredicted RBP8.13□□□□□ -1.11
COL11A1-208ENST00000470170 CD248Q9HCU0 757 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 SFMBT1Q9UHJ3 866 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 SLC4A7Q9Y6M7 1214 aa8.13□□□□□ -1.11
COL11A1-208ENST00000470170 CLASP2O75122 1294 aaKnown RBP8.12□□□□□ -1.11
COL11A1-208ENST00000470170 PTGS1P23219 599 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 LACTBP83111 547 aaPredicted RBP8.12□□□□□ -1.11
COL11A1-208ENST00000470170 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
COL11A1-208ENST00000470170 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 JMYQ8N9B5 988 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 ZSWIM2Q8NEG5 633 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 DNERQ8NFT8 737 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 MKL1Q969V6 931 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 SCLYQ96I15 445 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 DNAJC2Q99543 621 aaKnown RBP8.12□□□□□ -1.11
COL11A1-208ENST00000470170 BTBD7Q9P203 1132 aa8.12□□□□□ -1.11
COL11A1-208ENST00000470170 AOAHP28039 575 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 TOP3AQ13472 1001 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-208ENST00000470170 USP10Q14694 798 aaKnown RBP8.11□□□□□ -1.11
COL11A1-208ENST00000470170 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 ZNF585AQ6P3V2 769 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 DPP8Q6V1X1 898 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-208ENST00000470170 BRAPQ7Z569 592 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms