RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PLAAQ9Y263 795 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.74□□□□□ -1.49
BRCA2-202ENST00000470094 ZNF839A8K0R7 811 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 FBXO21O94952 628 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 C4BPAP04003 597 aaKnown RBP5.74□□□□□ -1.49
BRCA2-202ENST00000470094 IRF9Q00978 393 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 PFKPQ01813 784 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 DBPQ10586 325 aaPredicted RBP5.74□□□□□ -1.49
BRCA2-202ENST00000470094 ARHGAP44Q17R89 818 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 CFAP100Q494V2 611 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 FBLN7Q53RD9 439 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 TAF7LQ5H9L4 462 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 PRR31Q5SQ13 230 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 PKN3Q6P5Z2 889 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 GIMAP6Q6P9H5 292 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 KIAA0907Q7Z7F0 614 aaPredicted RBP5.74□□□□□ -1.49
BRCA2-202ENST00000470094 NIM1KQ8IY84 436 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 SYT8Q8NBV8 401 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 CHST14Q8NCH0 376 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 IGDCC4Q8TDY8 1250 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 ADAMTS17Q8TE56 1095 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 WNK4Q96J92 1243 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 BOCQ9BWV1 1114 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 L2HGDHQ9H9P8 463 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 KCNH7Q9NS40 1196 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 ARHGAP20Q9P2F6 1191 aa5.74□□□□□ -1.49
BRCA2-202ENST00000470094 DDX3XO00571 662 aaKnown RBP eCLIP5.73□□□□□ -1.49
BRCA2-202ENST00000470094 IGSF3O75054 1194 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 KRT37O76014 449 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 INHBBP09529 407 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 ZNF28P17035 718 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 GLRBP48167 497 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 MECP2P51608 486 aaKnown RBP5.73□□□□□ -1.49
BRCA2-202ENST00000470094 NEK4P51957 841 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 GJA9P57773 515 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 HERVK_113P62684 666 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 PHF19Q5T6S3 580 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 CDCA2Q69YH5 1023 aaPredicted RBP5.73□□□□□ -1.49
BRCA2-202ENST00000470094 FSTL4Q6MZW2 842 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 TRMT10BQ6PF06 316 aaKnown RBP5.73□□□□□ -1.49
BRCA2-202ENST00000470094 ZNF761Q86XN6 746 aaPredicted RBP5.73□□□□□ -1.49
BRCA2-202ENST00000470094 DHX37Q8IY37 1157 aaKnown RBP5.73□□□□□ -1.49
BRCA2-202ENST00000470094 FEZF2Q8TBJ5 459 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 MFSD3Q96ES6 412 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 SLC39A2Q9NP94 309 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 USP40Q9NVE5 1235 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 ZFP69BQ9UJL9 534 aa5.73□□□□□ -1.49
BRCA2-202ENST00000470094 CYP1A1P04798 512 aaPredicted RBP5.72□□□□□ -1.49
BRCA2-202ENST00000470094 AOAHP28039 575 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 IL13P35225 146 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 MLLT6P55198 1093 aaPredicted RBP5.72□□□□□ -1.49
BRCA2-202ENST00000470094 RTP5Q14D33 572 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 TMEM132BQ14DG7 1078 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 SEC23AQ15436 765 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 SMAD2Q15796 467 aaKnown RBP5.72□□□□□ -1.49
BRCA2-202ENST00000470094 PLEKHG4Q58EX7 1191 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 DALRD3Q5D0E6 543 aaKnown RBP5.72□□□□□ -1.49
BRCA2-202ENST00000470094 FAM26FQ5R3K3 315 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 NT5DC1Q5TFE4 455 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 MCTP2Q6DN12 878 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 SDE2Q6IQ49 451 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 CNNM4Q6P4Q7 775 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 OTOP1Q7RTM1 612 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 LRRTM3Q86VH5 581 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 FTSJ1Q9UET6 329 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
BRCA2-202ENST00000470094 PTPDC1A2A3K4 754 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 CBX4O00257 560 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 FOXP2O15409 715 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 KPNA6O60684 536 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 CHGBP05060 677 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 MMEP08473 750 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 PTGS1P23219 599 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 RGL3Q3MIN7 710 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 TM4SF20Q53R12 229 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 FAM124AQ86V42 546 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 ZDHHC14Q8IZN3 488 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 STPG3Q8N7X2 389 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 ZCCHC14Q8WYQ9 949 aaKnown RBP5.71□□□□□ -1.5
BRCA2-202ENST00000470094 DLG3Q92796 817 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 TACO1Q9BSH4 297 aaKnown RBP5.71□□□□□ -1.5
BRCA2-202ENST00000470094 TMEM168Q9H0V1 697 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 SLKQ9H2G2 1235 aaPredicted RBP5.71□□□□□ -1.5
BRCA2-202ENST00000470094 INCENPQ9NQS7 918 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 B4GALT6Q9UBX8 382 aa5.71□□□□□ -1.5
BRCA2-202ENST00000470094 OTOL1A6NHN0 477 aaPredicted RBP5.7□□□□□ -1.5
BRCA2-202ENST00000470094 H7C1D1 291 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 TRAF5O00463 557 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 NOBOXO60393 691 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 ZBTB48P10074 688 aaPredicted RBP5.7□□□□□ -1.5
BRCA2-202ENST00000470094 HSD3B2P26439 372 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 SDHAP31040 664 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 TTLL10Q6ZVT0 673 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 PPM1KQ8N3J5 372 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 TXNDC5Q8NBS9 432 aaKnown RBP5.7□□□□□ -1.5
BRCA2-202ENST00000470094 HIPK4Q8NE63 616 aa5.7□□□□□ -1.5
BRCA2-202ENST00000470094 DDX1Q92499 740 aaKnown RBP5.7□□□□□ -1.5
BRCA2-202ENST00000470094 LCORQ96JN0 433 aaPredicted RBP5.7□□□□□ -1.5
BRCA2-202ENST00000470094 GBP4Q96PP9 640 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms