RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 PFKFB3Q16875 520 aaPredicted RBP15.48■□□□□ 0.07
LINC00173-201ENST00000470091 TRIM71Q2Q1W2 868 aaKnown RBP15.48■□□□□ 0.07
LINC00173-201ENST00000470091 CNKSR3Q6P9H4 555 aa15.48■□□□□ 0.07
LINC00173-201ENST00000470091 ZSCAN16Q9H4T2 348 aaPredicted RBP15.48■□□□□ 0.07
LINC00173-201ENST00000470091 MTUS1Q9ULD2 1270 aa15.48■□□□□ 0.07
LINC00173-201ENST00000470091 KCNJ14Q9UNX9 436 aa15.48■□□□□ 0.07
LINC00173-201ENST00000470091 GOLGA6L22H0YM25 854 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 CXCL10P02778 98 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 TGFB3P10600 412 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 NCLP19338 710 aaKnown RBP15.47■□□□□ 0.07
LINC00173-201ENST00000470091 THPOP40225 353 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 KCNQ1P51787 676 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 GRB10Q13322 594 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 IKBKEQ14164 716 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 MBTPS1Q14703 1052 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 SAMD3Q8N6K7 520 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 C16orf70Q9BSU1 422 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 GDPD2Q9HCC8 539 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 MYH15Q9Y2K3 1946 aa15.47■□□□□ 0.07
LINC00173-201ENST00000470091 TCF20Q9UGU0 1960 aaKnown RBP15.46■□□□□ 0.07
LINC00173-201ENST00000470091 ABHD14A-ACY1A0A1B0GW23 586 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 H3BRB1 525 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 NOP56O00567 594 aaKnown RBP15.46■□□□□ 0.07
LINC00173-201ENST00000470091 FIBPO43427 364 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 PARNO95453 639 aaKnown RBP15.46■□□□□ 0.07
LINC00173-201ENST00000470091 MMP1P03956 469 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 HOXD8P13378 290 aaPredicted RBP15.46■□□□□ 0.07
LINC00173-201ENST00000470091 BMP1P13497 986 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 MRPS9P82933 396 aaKnown RBP15.46■□□□□ 0.07
LINC00173-201ENST00000470091 RBL2Q08999 1139 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 TRAF7Q6Q0C0 670 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 USP17L6PQ6QN14 398 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 CYFIP1Q7L576 1253 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 ATP6V0A1Q93050 837 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 RAD9AQ99638 391 aa15.46■□□□□ 0.07
LINC00173-201ENST00000470091 TUT1Q9H6E5 874 aaKnown RBP15.46■□□□□ 0.07
LINC00173-201ENST00000470091 C17orf102A2RUQ5 167 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 RSPH10B2B2RC85 870 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 LGALS2P05162 132 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 RSPH10BP0C881 870 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 XBP1P17861 261 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 POU3F3P20264 500 aaPredicted RBP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 SP4Q02446 784 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 GNL2Q13823 731 aaKnown RBP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 SAFBQ15424 915 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 GNPTABQ3T906 1256 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 UTP14CQ5TAP6 766 aaKnown RBP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 WWC2Q6AWC2 1192 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 HEATR3Q7Z4Q2 680 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 DIS3L2Q8IYB7 885 aaKnown RBP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 DBF4BQ8NFT6 615 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 GDPD5Q8WTR4 605 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
LINC00173-201ENST00000470091 TELO2Q9Y4R8 837 aa15.45■□□□□ 0.06
LINC00173-201ENST00000470091 SPATA31C2B4DYI2 1134 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 TREHO43280 583 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 LPXNO60711 386 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 LGR5O75473 907 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 GJB5O95377 273 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 KRT85P78386 507 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 AAK1Q2M2I8 961 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 BRAPQ7Z569 592 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 SERINC5Q86VE9 423 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 OXER1Q8TDS5 423 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 CUL5Q93034 780 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 RNPEPQ9H4A4 650 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 LMBRD1Q9NUN5 540 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
LINC00173-201ENST00000470091 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
LINC00173-201ENST00000470091 BTBD18B2RXH4 712 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 STXBP3O00186 592 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 PRPF40AO75400 957 aaKnown RBP15.43■□□□□ 0.06
LINC00173-201ENST00000470091 CTSHP09668 335 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 PTMSP20962 102 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 NEDD9Q14511 834 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 TYW1BQ6NUM6 668 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 TRIM50Q86XT4 487 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 MYOCDQ8IZQ8 938 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 TMEM87AQ8NBN3 555 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 OSBPL7Q9BZF2 842 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 TANC1Q9C0D5 1861 aa15.43■□□□□ 0.06
LINC00173-201ENST00000470091 LINC01553A4QN01 128 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 EFCAB14O75071 495 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 UPP2O95045 317 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 COL9A1P20849 921 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 U2AF2P26368 475 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC00173-201ENST00000470091 ICAM3P32942 547 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 KRT2P35908 639 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 NLRP5P59047 1200 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 NR5A1Q13285 461 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 NPY5RQ15761 445 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 HLA-CQ95604 372 aa15.42■□□□□ 0.06
LINC00173-201ENST00000470091 ZNF396Q96N95 335 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms