RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-205ENST00000469687 ACTN1P12814 892 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 ZNF76P36508 570 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 CKAP4Q07065 602 aaKnown RBP16.18■□□□□ 0.18
CBWD3-205ENST00000469687 KCNA1Q09470 495 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 SFMBT2Q5VUG0 894 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 FAM20AQ96MK3 541 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 EIF2AK1Q9BQI3 630 aaKnown RBP16.18■□□□□ 0.18
CBWD3-205ENST00000469687 EDEM3Q9BZQ6 932 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 IKZF4Q9H2S9 585 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-205ENST00000469687 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 SSU72P8A0A1W2PR75 194 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 SFI1A8K8P3 1242 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 MYBL2P10244 700 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 STAT2P52630 851 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 CTTNQ14247 550 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 EPM2AIP1Q7L775 607 aaPredicted RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 PIGOQ8TEQ8 1089 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 CNKSR1Q969H4 720 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 GDAP1L1Q96MZ0 367 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 ZBTB39O15060 712 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 CETN3O15182 167 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 PJA2O43164 708 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 SLC26A4O43511 780 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 CHMP2AO43633 222 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 MRPS25P82663 173 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 RAPGEF1Q13905 1077 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 EZH2Q15910 746 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 ZYXQ15942 572 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 KNOP1Q1ED39 458 aaKnown RBP16.17■□□□□ 0.18
CBWD3-205ENST00000469687 EDRF1Q3B7T1 1238 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 FAM133AQ8N9E0 248 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 GANQ9H2C0 597 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 HDAC9Q9UKV0 1011 aa16.17■□□□□ 0.18
CBWD3-205ENST00000469687 PSME4Q14997 1843 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 RAD17O75943 681 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 SERPING1P05155 500 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 SLC9A1P19634 815 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 OSBPL9Q96SU4 736 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 GBP3Q9H0R5 595 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 RBAK-RBAKDNI3L0D1 243 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 PIK3CDO00329 1044 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 CYP3A4P08684 503 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 CASP4P49662 377 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 DPY19L2P1Q6NXN4 242 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 TRAF3IP3Q9Y228 551 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
CBWD3-205ENST00000469687 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 ASTN1O14525 1302 aa16.16■□□□□ 0.18
CBWD3-205ENST00000469687 A0A087X0T9 212 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 AKAP3O75969 853 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 FAM228BP0C875 321 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 EPS15P42566 896 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 KLHDC7AQ5VTJ3 777 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 HDAC7Q8WUI4 952 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 ALS2CR12Q96Q35 445 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 TLR10Q9BXR5 811 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 PACSIN1Q9BY11 444 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 COL4A5P29400 1685 aa16.15■□□□□ 0.18
CBWD3-205ENST00000469687 CLIC2O15247 247 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 GCNT3O95395 438 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 TUBBP07437 444 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 DCAF17Q5H9S7 520 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 RINT1Q6NUQ1 792 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 OTOP1Q7RTM1 612 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 DNAAF5Q86Y56 855 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 SYN2Q92777 582 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 ARHGEF10LQ9HCE6 1279 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 VPS18Q9P253 973 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 ADAM21Q9UKJ8 722 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 COL2A1P02458 1487 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 CNTNAP1P78357 1384 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 EYA4O95677 639 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 KLRC1P26715 233 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 NAP1L1P55209 391 aaKnown RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 MIGA2Q7L4E1 593 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 TPH2Q8IWU9 490 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 DYDC2Q96IM9 177 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 HSD17B14Q9BPX1 270 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 POLR3CQ9BUI4 534 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 PDGFDQ9GZP0 370 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
CBWD3-205ENST00000469687 ZNF70Q9UC06 446 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-205ENST00000469687 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms