RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 KDM3AQ9Y4C1 1321 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
NPHP3-204ENST00000469232 TNPO2O14787 897 aaKnown RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 CTAGE5O15320 804 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 TRPA1O75762 1119 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 TBC1D8O95759 1140 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 NKX3-2P78367 333 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 MAP2K1Q02750 393 aaPredicted RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 NEDD9Q14511 834 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ECM1Q16610 540 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 LONRF3Q496Y0 759 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 CCDC183Q5T5S1 534 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 WDR78Q5VTH9 848 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 METTL7BQ6UX53 244 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 DPP9Q86TI2 863 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 SMAP1Q8IYB5 467 aaPredicted RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 TRMT44Q8IYL2 757 aaKnown RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 SCFD2Q8WU76 684 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 BLOC1S4Q9NUP1 217 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 KBTBD4Q9NVX7 518 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 FLRT1Q9NZU1 646 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 PCDHGA10Q9Y5H3 936 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 TK2O00142 265 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 POLR2DO15514 142 aaKnown RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 MED24O75448 989 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 FARP2O94887 1054 aaPredicted RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 SLITRK3O94933 977 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ARIH2O95376 493 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ZNF865P0CJ78 1059 aaPredicted RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 XRCC6P12956 609 aaKnown RBP eCLIP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 UBA1P22314 1058 aaKnown RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 CDC25AP30304 524 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 TXLNAP40222 546 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 JAK3P52333 1124 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 PRMT2P55345 433 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 GRM1Q13255 1194 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 CELF3Q5SZQ8 465 aaKnown RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 NT5DC1Q5TFE4 455 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 KRT79Q5XKE5 535 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 HAUS3Q68CZ6 603 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 IQSEC1Q6DN90 963 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 KANK3Q6NY19 840 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ABHD15Q6UXT9 468 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 CATSPER3Q86XQ3 398 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ERMNQ8TAM6 284 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 MTRQ99707 1265 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 EIF2AK1Q9BQI3 630 aaKnown RBP9.16□□□□□ -0.94
NPHP3-204ENST00000469232 ARHGAP39Q9C0H5 1083 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 NT5C3AQ9H0P0 336 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 SRRDQ9UH36 339 aa9.16□□□□□ -0.94
NPHP3-204ENST00000469232 WDR64B1ANS9 1081 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 KINO60870 393 aaKnown RBP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 LGR5O75473 907 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 STBD1O95210 358 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 MYL1P05976 194 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 PLCG1P19174 1290 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 SARSP49591 514 aaKnown RBP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 ZNF445P59923 1031 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 ACVR2BQ13705 512 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 KARSQ15046 597 aaKnown RBP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 DUSP28Q4G0W2 176 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 SNX29Q8TEQ0 813 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 SYAP1Q96A49 352 aaPredicted RBP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 SDF4Q9BRK5 362 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 FUCA2Q9BTY2 467 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 NUP62CLQ9H1M0 184 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 BCAS3Q9H6U6 928 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 JPH1Q9HDC5 661 aaPredicted RBP9.15□□□□□ -0.94
NPHP3-204ENST00000469232 SLC9A2Q9UBY0 812 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 TUBE1Q9UJT0 475 aa9.15□□□□□ -0.94
NPHP3-204ENST00000469232 WDR81Q562E7 1941 aa9.15□□□□□ -0.95
NPHP3-204ENST00000469232 GSTTP1A0A1W2PQM5 241 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 MARCH6O60337 910 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 FKTNO75072 461 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 P4HBP07237 508 aaKnown RBP9.14□□□□□ -0.95
NPHP3-204ENST00000469232 FLT3LGP49771 235 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 ACTR2P61160 394 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 ARHGAP1Q07960 439 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 TTLL4Q14679 1199 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 KIF22Q14807 665 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 CCL14Q16627 93 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 MAP3K21Q5TCX8 1036 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 RRAGBQ5VZM2 374 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 CAVIN1Q6NZI2 390 aaKnown RBP9.14□□□□□ -0.95
NPHP3-204ENST00000469232 SEPT14Q6ZU15 432 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 KCNK18Q7Z418 384 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 FBXO16Q8IX29 292 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-204ENST00000469232 C4orf19Q8IY42 314 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 PXYLP1Q8TE99 480 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 AFAP1L1Q8TED9 768 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 CALML4Q96GE6 196 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 PAGE5Q96GU1 130 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 ERO1AQ96HE7 468 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms