RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 WDR64B1ANS9 1081 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 IRF6O14896 467 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 OFD1O75665 1012 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 FAM13AO94988 1023 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 GNA14O95837 355 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 P4HBP07237 508 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 OSBPP22059 807 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 MTIF2P46199 727 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 DNM2P50570 870 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 APLP1P51693 650 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 MRPS9P82933 396 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 LRMPQ12912 555 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 TBX2Q13207 712 aaPredicted RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 CTTNQ14247 550 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 HERC4Q5GLZ8 1057 aaPredicted RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 ARMCX5Q6P1M9 558 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 TPH2Q8IWU9 490 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 UIMC1Q96RL1 719 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 IWS1Q96ST2 819 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 REEP2Q9BRK0 252 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 TIPINQ9BVW5 301 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 NAA15Q9BXJ9 866 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 BHMT2Q9H2M3 363 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 A1CFQ9NQ94 594 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 OLFML3Q9NRN5 406 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 TAB2Q9NYJ8 693 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 CYP39A1Q9NYL5 469 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 DBR1Q9UK59 544 aaKnown RBP10.36□□□□□ -0.75
SMC1A-205ENST00000469129 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
SMC1A-205ENST00000469129 ARHGEF35A5YM69 484 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 AKR1B15C9JRZ8 316 aaPredicted RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 KIF2AO00139 706 aaPredicted RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 DDX39AO00148 427 aaKnown RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 EIF3DO15371 548 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 ARHGAP6O43182 974 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 SLITRK3O94933 977 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 LYPLA2O95372 231 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 SLC25A27O95847 323 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 NR3C2P08235 984 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 PBX1P40424 430 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 PMS1P54277 932 aaKnown RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 FKBP1BP68106 108 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 GIT2Q14161 759 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 EDRF1Q3B7T1 1238 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 DNTTIP2Q5QJE6 756 aaKnown RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 FKBP15Q5T1M5 1219 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 TREML2Q5T2D2 321 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 ANKRD40Q6AI12 368 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 ZNF746Q6NUN9 644 aaPredicted RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 SFR1Q86XK3 245 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 SMAP1Q8IYB5 467 aaPredicted RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 CEP63Q96MT8 703 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 INPP4AQ96PE3 977 aaPredicted RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 PANX2Q96RD6 677 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
SMC1A-205ENST00000469129 ZHX3Q9H4I2 956 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 KCND1Q9NSA2 647 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
SMC1A-205ENST00000469129 MCM3APO60318 1980 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 PES1O00541 588 aaKnown RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 DHX15O43143 795 aaKnown RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 CALUO43852 315 aaPredicted RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 STX10O60499 249 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 MFAP3LO75121 409 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 GUCY2CP25092 1073 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 QARSP47897 775 aaKnown RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 PSMC6P62333 389 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 HERVK_113P62684 666 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 FKBP3Q00688 224 aaKnown RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 UBXN1Q04323 297 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 ITGB3BPQ13352 177 aaPredicted RBP10.34□□□□□ -0.75
SMC1A-205ENST00000469129 SNAPC2Q13487 334 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 ALCAMQ13740 583 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 MAN2A1Q16706 1144 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 BMT2Q1RMZ1 405 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 ARSHQ5FYA8 562 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 RINT1Q6NUQ1 792 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 ANKRD35Q8N283 1001 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 OPTNQ96CV9 577 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 CLMNQ96JQ2 1002 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 SENP7Q9BQF6 1050 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 TUBGCP2Q9BSJ2 902 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 NUP58Q9BVL2 599 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 SPATC1LQ9H0A9 340 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 VPS16Q9H269 839 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 SEMA6BQ9H3T3 888 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 PARVGQ9HBI0 331 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 SAMM50Q9Y512 469 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
SMC1A-205ENST00000469129 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 NPHP3-ACAD11A0A0J9YXS1 232 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 GOLGA6L9A6NEM1 432 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 TEX33O43247 280 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms