RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 GIT2Q14161 759 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 ZNF792Q3KQV3 632 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 RINT1Q6NUQ1 792 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 BHMT2Q9H2M3 363 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 FANCLQ9NW38 375 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 KCND2Q9NZV8 630 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 WRAP73Q9P2S5 460 aaPredicted RBP16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 SLC9A2Q9UBY0 812 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 DBR1Q9UK59 544 aaKnown RBP16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 NFE2L3Q9Y4A8 694 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 PCDHA10Q9Y5I2 948 aa16.71■□□□□ 0.27
CRAMP1-206ENST00000468839 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 DKC1O60832 514 aaKnown RBP eCLIP16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 ATG7O95352 703 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 IDEP14735 1019 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 ZNF18P17022 549 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 CDC25BP30305 580 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 MAPK4P31152 587 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 PSMC5P62195 406 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 COASYQ13057 564 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 WDR78Q5VTH9 848 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 C1orf186Q6ZWK4 172 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 BANK1Q8NDB2 785 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 PIGOQ8TEQ8 1089 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 NELFBQ8WX92 580 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 MRFAP1L1Q96HT8 127 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 CTNND2Q9UQB3 1225 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
CRAMP1-206ENST00000468839 TMEM88BA6NKF7 163 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 PSMA7O14818 248 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 KRT18P05783 430 aaKnown RBP16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 CCNE1P24864 410 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 SP2Q02086 613 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 NEDD9Q14511 834 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 FOXR2Q6PJQ5 311 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 ABHD15Q6UXT9 468 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 TRMT44Q8IYL2 757 aaKnown RBP16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 GUF1Q8N442 669 aaKnown RBP16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 PCDHA2Q9Y5H9 948 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
CRAMP1-206ENST00000468839 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 ZBTB39O15060 712 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 COBLO75128 1261 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 TOMM70O94826 608 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 PSAPP07602 524 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 ADORA2AP29274 412 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 TM4SF4P48230 202 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 STX17P56962 302 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 FANCCQ00597 558 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 GRB14Q14449 540 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 TAF1CQ15572 869 aaPredicted RBP16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 FAM26FQ5R3K3 315 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 CENPPQ6IPU0 288 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 GPR142Q7Z601 462 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 PLEKHH3Q7Z736 793 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 REEP2Q9BRK0 252 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 BCAS3Q9H6U6 928 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
CRAMP1-206ENST00000468839 BICDL2A1A5D9 508 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 ARHGEF35A5YM69 484 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 SLC15A5A6NIM6 579 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 GAP43P17677 238 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 GUCY2CP25092 1073 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 ACTR2P61160 394 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 SREBF2Q12772 1141 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 CDKAL1Q5VV42 579 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 TTI2Q6NXR4 508 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 C17orf99Q6UX52 265 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 P2RX5Q93086 422 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 HPS3Q969F9 1004 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 SAMSN1Q9NSI8 373 aaKnown RBP16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 ODF2LQ9ULJ1 636 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
CRAMP1-206ENST00000468839 IGKV6D-21A0A0A0MT36 114 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 STBD1O95210 358 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 SUPT20HL2P0C7V6 817 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 UBA1P22314 1058 aaKnown RBP16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 RARRES1P49788 294 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 UGCGQ16739 394 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 CCDC62Q6P9F0 684 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms