RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
SSB-208ENST00000468600 OR14A2Q96R54 314 aa5.58□□□□□ -1.52
SSB-208ENST00000468600 CRAMP1Q96RY5 1269 aa5.58□□□□□ -1.52
SSB-208ENST00000468600 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.58□□□□□ -1.524e-8■■■■■ 28.7
SSB-208ENST00000468600 DLX3O60479 287 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 ENO2P09104 434 aaPredicted RBP5.57□□□□□ -1.52
SSB-208ENST00000468600 C1SP09871 688 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 FAHP16930 419 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 CR2P20023 1033 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 CACTINQ8WUQ7 758 aaKnown RBP5.57□□□□□ -1.52
SSB-208ENST00000468600 ZG16BQ96DA0 208 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 TINF2Q9BSI4 451 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 PTPN22Q9Y2R2 807 aa5.57□□□□□ -1.52
SSB-208ENST00000468600 CDC14BO60729 498 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 CUTAO60888 179 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 MAKP20794 623 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 ACRV1P26436 265 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 ARID5AQ03989 594 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 TUSC3Q13454 348 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 TUBA3CQ13748 450 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 CD276Q5ZPR3 534 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 TUBA3EQ6PEY2 450 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 OTOP3Q7RTS5 596 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 MCF2L2Q86YR7 1114 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 CLEC4DQ8WXI8 215 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 ZFYVE21Q9BQ24 234 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 IER2Q9BTL4 223 aa5.56□□□□□ -1.52
SSB-208ENST00000468600 MSCO60682 206 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 FGFR1P11362 822 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 TCF3P15923 654 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 POLD1P28340 1107 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 PFKPQ01813 784 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 HSP90AA2PQ14568 343 aaPredicted RBP5.55□□□□□ -1.52
SSB-208ENST00000468600 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 HABP4Q5JVS0 413 aaKnown RBP5.55□□□□□ -1.52
SSB-208ENST00000468600 MAMDC4Q6UXC1 1216 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 LBX2Q6XYB7 198 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 Q6ZSN1 163 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 IL17DQ8TAD2 202 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 ZNF483Q8TF39 744 aaPredicted RBP5.55□□□□□ -1.52
SSB-208ENST00000468600 DCAF4Q8WV16 495 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 VOPP1Q96AW1 172 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 GMLQ99445 158 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 DPYSL5Q9BPU6 564 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 TACO1Q9BSH4 297 aaKnown RBP5.55□□□□□ -1.52
SSB-208ENST00000468600 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 NR2E1Q9Y466 385 aa5.55□□□□□ -1.52
SSB-208ENST00000468600 IQCA1LA6NCM1 817 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 ATXN1P54253 815 aaKnown RBP5.54□□□□□ -1.52
SSB-208ENST00000468600 RRADP55042 308 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 DDR2Q16832 855 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 KIZQ2M2Z5 673 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 MRGPRGQ86SM5 289 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 LDLRAD3Q86YD5 345 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 HOMEZQ8IX15 550 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 CELF2-AS1Q8N7Q2 184 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 SLC43A3Q8NBI5 491 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 UHMK1Q8TAS1 419 aaKnown RBP5.54□□□□□ -1.52
SSB-208ENST00000468600 PHF20Q9BVI0 1012 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 C12orf65Q9H3J6 166 aaKnown RBP5.54□□□□□ -1.52
SSB-208ENST00000468600 MMRN2Q9H8L6 949 aa5.54□□□□□ -1.52
SSB-208ENST00000468600 AURKAIP1Q9NWT8 199 aaPredicted RBP5.54□□□□□ -1.52
SSB-208ENST00000468600 U2SURPO15042 1029 aaKnown RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 PLSCR1O15162 318 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 KLF4O43474 513 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 RPS19P39019 145 aaKnown RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 EPHA5P54756 1037 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 KRTAP10-9P60411 292 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 SPIRE1Q08AE8 756 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 USP53Q70EK8 1073 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 RBM12BQ8IXT5 1001 aaKnown RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 ZNF808Q8N4W9 903 aaPredicted RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 ST13P5Q8NFI4 369 aaPredicted RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 SCYL1Q96KG9 808 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 AARSD1Q9BTE6 412 aaKnown RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 PLA2G12BQ9BX93 195 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 MSL2Q9HCI7 577 aa5.53□□□□□ -1.52
SSB-208ENST00000468600 R3HCC1Q9Y3T6 440 aaKnown RBP5.53□□□□□ -1.52
SSB-208ENST00000468600 ESYT3A0FGR9 886 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 LTFP02788 710 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 GNAT1P11488 350 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 GRK2P25098 689 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 LMO1P25800 156 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 GRK3P35626 688 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 GPR85P60893 370 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 TOP3AQ13472 1001 aaPredicted RBP5.52□□□□□ -1.53
SSB-208ENST00000468600 STYK1Q6J9G0 422 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 DPP8Q6V1X1 898 aaPredicted RBP5.52□□□□□ -1.53
SSB-208ENST00000468600 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSB-208ENST00000468600 HNRNPLLQ8WVV9 542 aaKnown RBP5.52□□□□□ -1.53
SSB-208ENST00000468600 OSBP2Q969R2 916 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 ZNF669Q96BR6 464 aaPredicted RBP5.52□□□□□ -1.53
SSB-208ENST00000468600 ARHGEF4Q9NR80 690 aa5.52□□□□□ -1.53
SSB-208ENST00000468600 PPARGC1AQ9UBK2 798 aaKnown RBP5.52□□□□□ -1.53
SSB-208ENST00000468600 REXO2Q9Y3B8 237 aaKnown RBP5.52□□□□□ -1.53
SSB-208ENST00000468600 IL18BPO95998 194 aa5.51□□□□□ -1.53
SSB-208ENST00000468600 PABPC1P11940 636 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms