RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 C16orf70Q9BSU1 422 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 SEZ6LQ9BYH1 1024 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 AZI2Q9H6S1 392 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 BCAS3Q9H6U6 928 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 PDLIM7Q9NR12 457 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 TBC1D22BQ9NU19 505 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 TRMT13Q9NUP7 481 aaKnown RBP4.1□□□□□ -1.75
COMMD3-207ENST00000468469 ERAP1Q9NZ08 941 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 NOD1Q9Y239 953 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 TELO2Q9Y4R8 837 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 SAMM50Q9Y512 469 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 KIAA1217Q5T5P2 1943 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 ZNFX1Q9P2E3 1918 aaKnown RBP4.1□□□□□ -1.75
COMMD3-207ENST00000468469 IGSF9BQ9UPX0 1349 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 SMCHD1A6NHR9 2005 aa4.1□□□□□ -1.75
COMMD3-207ENST00000468469 CYP3A7-CYP3A51PA0A087WV96 503 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 GSTTP1A0A1W2PQM5 241 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 C17orf102A2RUQ5 167 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 VPS37CA5D8V6 355 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TRIM43BA6NCK2 446 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 H0YGN5 161 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 H3BRB1 525 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 HAS3O00219 553 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 WNT7AO00755 349 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TBX3O15119 743 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 EDIL3O43854 480 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 MARCH6O60337 910 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PPFIA4O75335 1185 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 BAG4O95429 457 aaKnown RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 CCNE2O96020 404 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PSAPP07602 524 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 OR52Z1P0C646 297 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 SMIM10L2AP0DMW4 78 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 SMIM10L2BP0DMW5 78 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PDCP20941 246 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 CYP3A7P24462 503 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 MCM7P33993 719 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TRAPPC10P48553 1259 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 SLC26A2P50443 739 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 CDK7P50613 346 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 STAT5BP51692 787 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PTPN11Q06124 597 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 FAAP100Q0VG06 881 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PPFIA1Q13136 1202 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 ORC2Q13416 577 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 NBR1Q14596 966 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 CALCRLQ16602 461 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PTGISQ16647 500 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 RILPL1Q5EBL4 403 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TTC38Q5R3I4 469 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 FAM160B1Q5W0V3 765 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 LARP1BQ659C4 914 aaKnown RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 NCAPH2Q6IBW4 605 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 GDF6Q6KF10 455 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 SESTD1Q86VW0 696 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 CCDC60Q8IWA6 550 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 SLFN12Q8IYM2 578 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 CCDC155Q8N6L0 562 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 EFCAB3Q8N7B9 438 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 RDM1Q8NG50 284 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 AFAP1L1Q8TED9 768 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 LMBR1Q8WVP7 490 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 ATP6V0A1Q93050 837 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 GJA10Q969M2 543 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TRIM43Q96BQ3 446 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 FAM20AQ96MK3 541 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 MBOAT7Q96N66 472 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TOX2Q96NM4 488 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 PPP1R12CQ9BZL4 782 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 UNC45AQ9H3U1 944 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 HIPK3Q9H422 1215 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 SMARCAD1Q9H4L7 1026 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TUT1Q9H6E5 874 aaKnown RBP4.09□□□□□ -1.75
COMMD3-207ENST00000468469 KCNMB3Q9NPA1 279 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 ZNF302Q9NR11 478 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TMEM39AQ9NV64 488 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 HDAC6Q9UBN7 1215 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 GTF2IRD1Q9UHL9 959 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TBX21Q9UL17 535 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 GRIN2DO15399 1336 aa4.09□□□□□ -1.75
COMMD3-207ENST00000468469 TANC1Q9C0D5 1861 aa4.09□□□□□ -1.76
COMMD3-207ENST00000468469 ALPK3Q96L96 1907 aa4.09□□□□□ -1.76
COMMD3-207ENST00000468469 IGKV6D-21A0A0A0MT36 114 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 KIAA0355O15063 1070 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 DHX15O43143 795 aaKnown RBP4.08□□□□□ -1.76
COMMD3-207ENST00000468469 LGR5O75473 907 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 PSMD10O75832 226 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 ATG7O95352 703 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 CD4P01730 458 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 OATP04181 439 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 COL1A2P08123 1366 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 GNAT1P11488 350 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 CYP2C9P11712 490 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 RAG1P15918 1043 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 U2AF2P26368 475 aaKnown RBP eCLIP4.08□□□□□ -1.762e-8■■■□□ 15.6
COMMD3-207ENST00000468469 HOXC8P31273 242 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 MAGEA10P43363 369 aaPredicted RBP4.08□□□□□ -1.76
COMMD3-207ENST00000468469 IGBP1P78318 339 aa4.08□□□□□ -1.76
COMMD3-207ENST00000468469 MDM2Q00987 491 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms