RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 MARCH8Q5T0T0 291 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-215ENST00000468018 Q7L0L9 218 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 OTOP2Q7RTS6 562 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 DEFB128Q7Z7B8 93 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 WASF1Q92558 559 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 GLG1Q92896 1179 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 SLC5A5Q92911 643 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 TNFRSF25Q93038 417 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 MTIF3Q9H2K0 278 aaKnown RBP17.21■□□□□ 0.35
ATG4B-215ENST00000468018 MTMR10Q9NXD2 777 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
ATG4B-215ENST00000468018 JAK2O60674 1132 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 SLC26A2P50443 739 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 STAT5BP51692 787 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 PPFIA1Q13136 1202 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-215ENST00000468018 PLCB4Q15147 1175 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 NONOQ15233 471 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■□□ 14.8
ATG4B-215ENST00000468018 GRIK4Q16099 956 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 B3GNT9Q6UX72 402 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 CCDC60Q8IWA6 550 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-215ENST00000468018 SMAP1Q8IYB5 467 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-215ENST00000468018 DEFB123Q8N688 67 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 OXER1Q8TDS5 423 aa17.2■□□□□ 0.34
ATG4B-215ENST00000468018 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-215ENST00000468018 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 BAIAP3O94812 1187 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 TDP2O95551 362 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 MARK3P27448 753 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 KRT76Q01546 638 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 EARS2Q5JPH6 523 aaKnown RBP17.19■□□□□ 0.34
ATG4B-215ENST00000468018 FAM26DQ5JW98 314 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 TAF2Q6P1X5 1199 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 ETNPPLQ8TBG4 499 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 RIT2Q99578 217 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 PBX4Q9BYU1 374 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 AZI2Q9H6S1 392 aa17.19■□□□□ 0.34
ATG4B-215ENST00000468018 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-215ENST00000468018 PSMD10O75832 226 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 ACTN1P12814 892 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 INSRRP14616 1297 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 ATP4AP20648 1035 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 DNAJB2P25686 324 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 THPOP40225 353 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 INF2Q27J81 1249 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 TCTN1Q2MV58 587 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 ZNF697Q5TEC3 545 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 CNKSR3Q6P9H4 555 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 GUCD1Q96NT3 240 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
ATG4B-215ENST00000468018 TUBE1Q9UJT0 475 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 PCDHA10Q9Y5I2 948 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 COL6A3P12111 3177 aa17.18■□□□□ 0.34
ATG4B-215ENST00000468018 RRN3P2A6NIE6 340 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 RSPH10B2B2RC85 870 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 MMP1P03956 469 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 RSPH10BP0C881 870 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 PBX2P40425 430 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 MGAT3Q09327 533 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 RABEP1Q15276 862 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 FAM160B1Q5W0V3 765 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 PPP4R3AQ6IN85 833 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 MIS18BP1Q6P0N0 1132 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 ATP8B4Q8TF62 1192 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-215ENST00000468018 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 SLC9A7Q96T83 725 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 SEMA6BQ9H3T3 888 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-215ENST00000468018 SLC4A7Q9Y6M7 1214 aa17.17■□□□□ 0.34
ATG4B-215ENST00000468018 COL1A2P08123 1366 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 POTEB3A0JP26 581 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 ZBTB42B2RXF5 422 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 SLC37A4O43826 429 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 KRT2P35908 639 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 NR5A1Q13285 461 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 PLEKHG4Q58EX7 1191 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 POTEBQ6S5H4 581 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 NEK8Q86SG6 692 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 PHOSPHO2Q8TCD6 241 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 TNPO1Q92973 898 aaKnown RBP17.16■□□□□ 0.34
ATG4B-215ENST00000468018 KCNMB3Q9NPA1 279 aa17.16■□□□□ 0.34
ATG4B-215ENST00000468018 WDR64B1ANS9 1081 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 RBAK-RBAKDNI3L0D1 243 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 HBP1O60381 514 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 GAS7O60861 476 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 CHRNA1P02708 482 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
ATG4B-215ENST00000468018 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 PIK3AP1Q6ZUJ8 805 aa17.15■□□□□ 0.34
ATG4B-215ENST00000468018 RDM1Q8NG50 284 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms