RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DEXIO95424 95 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 ITGB5P18084 799 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 ZNF76P36508 570 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 ERVK-21P61565 698 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 DEFB103AP81534 67 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 SP4Q02446 784 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 AP3B2Q13367 1082 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 RPAINQ86UA6 219 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 SEPT8Q92599 483 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 TNPO1Q92973 898 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 SAMD11Q96NU1 681 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 CERS4Q9HA82 394 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 JADE2Q9NQC1 790 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.15
CCHCR1-211ENST00000467553 ESYT2A0FGR8 921 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 CDKL5O76039 1030 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 BMP1P13497 986 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 GRB10Q13322 594 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 MTMR1Q13613 665 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 HIC1Q14526 733 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 MBTPS1Q14703 1052 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 REXO1Q8N1G1 1221 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 DBF4BQ8NFT6 615 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 CYP2W1Q8TAV3 490 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 BICD2Q8TD16 824 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 WNT8BQ93098 351 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 MXRA8Q9BRK3 442 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 SH3GLB2Q9NR46 395 aa16.01■□□□□ 0.15
CCHCR1-211ENST00000467553 EPOPA6NHQ4 379 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 RFXAPO00287 272 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 TREHO43280 583 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 SREBF1P36956 1147 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 ADAM17P78536 824 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 HTRA4P83105 476 aaPredicted RBP16■□□□□ 0.15
CCHCR1-211ENST00000467553 ME3Q16798 604 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 FAM26DQ5JW98 314 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 MCTP2Q6DN12 878 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 FAM43BQ6ZT52 329 aaPredicted RBP16■□□□□ 0.15
CCHCR1-211ENST00000467553 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 HLA-CQ95604 372 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 AIFM3Q96NN9 605 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 SIP14410 1827 aa16■□□□□ 0.15
CCHCR1-211ENST00000467553 LINC01553A4QN01 128 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 LPXNO60711 386 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 LARGE1O95461 756 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 ARP10275 920 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 ARHGAP4P98171 946 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 CEP55Q53EZ4 464 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 UTP14CQ5TAP6 766 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 RSPH3Q86UC2 560 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 SP7Q8TDD2 431 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 KCNH7Q9NS40 1196 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 ERAP1Q9NZ08 941 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 TELO2Q9Y4R8 837 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 COL4A6Q14031 1691 aa15.99■□□□□ 0.15
CCHCR1-211ENST00000467553 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 KCNA2P16389 499 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 TCTN1Q2MV58 587 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 MYOCDQ8IZQ8 938 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 SMARCAD1Q9H4L7 1026 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 SUGCTQ9HAC7 445 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 SETD4Q9NVD3 440 aa15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 ORC3Q9UBD5 711 aaPredicted RBP15.98■□□□□ 0.15
CCHCR1-211ENST00000467553 RRN3P2A6NIE6 340 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 MEIS1O00470 390 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 CTDNEP1O95476 244 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 TCF7P36402 384 aaPredicted RBP15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 PLA2G4DQ86XP0 818 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 BLIDQ8IZY5 108 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 LMBR1Q8WVP7 490 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 GTF3C6Q969F1 213 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 UIMC1Q96RL1 719 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 KIF2CQ99661 725 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 PCDHA4Q9UN74 947 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
CCHCR1-211ENST00000467553 COL4A4P53420 1690 aaPredicted RBP15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 CYP3A4P08684 503 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 XBP1P17861 261 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 PTPROQ16827 1216 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 TMCO2Q7Z6W1 182 aaPredicted RBP15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 FBXO22Q8NEZ5 403 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 SDF4Q9BRK5 362 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 IFIH1Q9BYX4 1025 aaKnown RBP15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 GJB4Q9NTQ9 266 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 LIMCH1Q9UPQ0 1083 aa15.96■□□□□ 0.15
CCHCR1-211ENST00000467553 SQORQ9Y6N5 450 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms