RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	IMPACT	Q9P2X3	320 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	ADD3	Q9UEY8	706 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	NFASC	O94856	1347 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	MCM3AP	O60318	1980 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	MYH9	P35579	1960 aa	Known RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435		A0A1B0GTH6	734 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	SOWAHB	A6NEL2	793 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	KCNJ18	B7U540	433 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	BTBD19	C9JJ37	291 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	PDHX	O00330	501 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	RGS20	O76081	388 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCNE2	O96020	404 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZBTB48	P10074	688 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	CYP2C8	P10632	490 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	KCNA2	P16389	499 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ERVK-9	P63128	1117 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ERVK-24	P63145	666 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	KCNJ12	Q14500	433 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	CHADL	Q6NUI6	762 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	RINT1	Q6NUQ1	792 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	APTX	Q7Z2E3	356 aa	Known RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ANKRD23	Q86SG2	305 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	SFR1	Q86XK3	245 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	VSTM4	Q8IW00	320 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	MYOCD	Q8IZQ8	938 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	FAM133A	Q8N9E0	248 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	SHCBP1	Q8NEM2	672 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	RDM1	Q8NG50	284 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	BRI3BP	Q8WY22	251 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	MMP19	Q99542	508 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	DUSP9	Q99956	384 aa	Known RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	MROH8	Q9H579	483 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZSWIM4	Q9H7M6	989 aa		13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	LIMA1	Q9UHB6	759 aa	Known RBP	13.66	□□□□□ -0.22
HDLBP-231	ENST00000467435	ARHGEF35	A5YM69	484 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	EIF3J	O75822	258 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	EDNRB	P24530	442 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	QARS	P47897	775 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	GSDMD	P57764	484 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	KRT31	Q15323	416 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	LRRC41	Q15345	812 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435		Q3C1V9	767 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	FILIP1L	Q4L180	1135 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	TCP11X2	Q5H9J9	407 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	WDR78	Q5VTH9	848 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	SPRYD7	Q5W111	196 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	ANKRD40	Q6AI12	368 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	CENPP	Q6IPU0	288 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	CSGALNACT2	Q8N6G5	542 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	GLIS3	Q8NEA6	775 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	MPHOSPH6	Q99547	160 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	TSG101	Q99816	390 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	SENP7	Q9BQF6	1050 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	SRRT	Q9BXP5	876 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	FGFBP2	Q9BYJ0	223 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	SEMA6B	Q9H3T3	888 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	R3HDML	Q9H3Y0	253 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	JPH1	Q9HDC5	661 aa	Predicted RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	KCND2	Q9NZV8	630 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	TBC1D7	Q9P0N9	293 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	PCDHA2	Q9Y5H9	948 aa		13.65	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZNF236	Q9UL36	1845 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	RSPH10B2	B2RC85	870 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435		B4DLN1	442 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	SPATA31C2	B4DYI2	1134 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	ZBTB39	O15060	712 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	FAM13A	O94988	1023 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	KIF20A	O95235	890 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	LYPLA2	O95372	231 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	RSPH10B	P0C881	870 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	GAP43	P17677	238 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	EEF1G	P26641	437 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	ICAM3	P32942	547 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	COPB1	P53618	953 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	PSMC5	P62195	406 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	CCNA1	P78396	465 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	LRRC63	Q05C16	580 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	FSTL1	Q12841	308 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	KCTD2	Q14681	263 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	UGCG	Q16739	394 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	C1orf186	Q6ZWK4	172 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	FAM114A1	Q8IWE2	563 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	CCDC150	Q8NCX0	1101 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	CCDC43	Q96MW1	224 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	TAB2	Q9NYJ8	693 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	DBR1	Q9UK59	544 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	COL4A3BP	Q9Y5P4	624 aa		13.64	□□□□□ -0.23
HDLBP-231	ENST00000467435	ITGBL1	O95965	494 aa	Predicted RBP	13.63	□□□□□ -0.23
HDLBP-231	ENST00000467435	PGK2	P07205	417 aa		13.63	□□□□□ -0.23
HDLBP-231	ENST00000467435	HUNK	P57058	714 aa		13.63	□□□□□ -0.23
HDLBP-231	ENST00000467435	NR1I3	Q14994	352 aa		13.63	□□□□□ -0.23
HDLBP-231	ENST00000467435	PTPN21	Q16825	1174 aa		13.63	□□□□□ -0.23
HDLBP-231	ENST00000467435	CST9	Q5W186	159 aa		13.63	□□□□□ -0.23
HDLBP-231	ENST00000467435	FOXR2	Q6PJQ5	311 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms