RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 EPM2AIP1Q7L775 607 aaPredicted RBP12.62□□□□□ -0.39
HPS1-208ENST00000467246 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
HPS1-208ENST00000467246 TEPSINQ96N21 525 aa12.62□□□□□ -0.39
HPS1-208ENST00000467246 NLRC4Q9NPP4 1024 aa12.62□□□□□ -0.39
HPS1-208ENST00000467246 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
HPS1-208ENST00000467246 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
HPS1-208ENST00000467246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
HPS1-208ENST00000467246 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 GAS7O60861 476 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 NOL4O94818 638 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 GNA14O95837 355 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 MARSP56192 900 aaKnown RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 PPP2R5CQ13362 524 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 KNOP1Q1ED39 458 aaKnown RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 EDRF1Q3B7T1 1238 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 ZC3H3Q8IXZ2 948 aaKnown RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 RABGGTAQ92696 567 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 COL20A1Q9P218 1284 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 CCPG1Q9ULG6 757 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 KIF13BQ9NQT8 1826 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 NFKBIEO00221 500 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 NFIBO00712 420 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 CETN3O15182 167 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 KRT86O43790 486 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 TGFB2P61812 414 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 IRX5P78411 483 aaPredicted RBP12.61□□□□□ -0.39
HPS1-208ENST00000467246 ZNF662Q6ZS27 426 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 ZNF577Q9BSK1 485 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 PARD6BQ9BYG5 372 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
HPS1-208ENST00000467246 MACROD2A1Z1Q3 448 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 SEC31AO94979 1220 aaKnown RBP12.6□□□□□ -0.39
HPS1-208ENST00000467246 ATP1A1P05023 1023 aaKnown RBP12.6□□□□□ -0.39
HPS1-208ENST00000467246 ICAM1P05362 532 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 PRELPP51888 382 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 KIF11P52732 1056 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 SPA17Q15506 151 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 IKZF4Q9H2S9 585 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 UNC45AQ9H3U1 944 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 TUFT1Q9NNX1 390 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 ARGLU1Q9NWB6 273 aaPredicted RBP12.6□□□□□ -0.39
HPS1-208ENST00000467246 TRAF3IP3Q9Y228 551 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
HPS1-208ENST00000467246 GCNT3O95395 438 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 VAV2P52735 878 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 TUBB2AQ13885 445 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 TUBB2BQ9BVA1 445 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
HPS1-208ENST00000467246 PKD2L1Q9P0L9 805 aa12.6□□□□□ -0.39
HPS1-208ENST00000467246 IPO5O00410 1097 aaKnown RBP12.59□□□□□ -0.39
HPS1-208ENST00000467246 ITGB5P18084 799 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 POLR2FP61218 127 aaKnown RBP12.59□□□□□ -0.39
HPS1-208ENST00000467246 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 TMCO3Q6UWJ1 677 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 C1orf186Q6ZWK4 172 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 PRPF38AQ8NAV1 312 aaKnown RBP12.59□□□□□ -0.39
HPS1-208ENST00000467246 IL31RAQ8NI17 732 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 IFIH1Q9BYX4 1025 aaKnown RBP12.59□□□□□ -0.39
HPS1-208ENST00000467246 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 FAM53CQ9NYF3 392 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 PCDHA13Q9Y5I0 950 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 FHOD1Q9Y613 1164 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
HPS1-208ENST00000467246 AKR1B10O60218 316 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 TLR2O60603 784 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 SRGAP2O75044 1071 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 ZRANB2O95218 330 aaKnown RBP eCLIP12.59□□□□□ -0.39
HPS1-208ENST00000467246 HSD17B4P51659 736 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
HPS1-208ENST00000467246 TNIP1Q15025 636 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 HGSNATQ68CP4 663 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 TRAPPC11Q7Z392 1133 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 HOMER2Q9NSB8 354 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 CEP72Q9P209 647 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 ASTN1O14525 1302 aa12.59□□□□□ -0.39
HPS1-208ENST00000467246 PDXKO00764 312 aa12.58□□□□□ -0.39
HPS1-208ENST00000467246 CLIC2O15247 247 aa12.58□□□□□ -0.39
HPS1-208ENST00000467246 AKAP3O75969 853 aa12.58□□□□□ -0.39
HPS1-208ENST00000467246 NMT1P30419 496 aaKnown RBP12.58□□□□□ -0.39
HPS1-208ENST00000467246 WHAMMP3Q1A5X7 153 aa12.58□□□□□ -0.39
HPS1-208ENST00000467246 TBC1D10BQ4KMP7 808 aaPredicted RBP12.58□□□□□ -0.39
HPS1-208ENST00000467246 ZC2HC1CQ53FD0 456 aaPredicted RBP12.58□□□□□ -0.39
HPS1-208ENST00000467246 MYCT1Q8N699 235 aa12.58□□□□□ -0.39
HPS1-208ENST00000467246 PURBQ96QR8 312 aaKnown RBP12.58□□□□□ -0.39
HPS1-208ENST00000467246 MXRA8Q9BRK3 442 aa12.58□□□□□ -0.39
HPS1-208ENST00000467246 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms