RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 CACTINQ8WUQ7 758 aaKnown RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 TAAR1Q96RJ0 339 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 RMDN3Q96TC7 470 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 ACAD9Q9H845 621 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 AGO4Q9HCK5 861 aaKnown RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 PXMP2Q9NR77 195 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 TBC1D22BQ9NU19 505 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 SPTLC3Q9NUV7 552 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 ADD3Q9UEY8 706 aaKnown RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
APOBEC1-202ENST00000467171 DHX15O43143 795 aaKnown RBP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 MAP3K7O43318 606 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 KIF20AO95235 890 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 LYPLA2O95372 231 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 FCER1AP12319 257 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 PBX1P40424 430 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 KCNJ6P48051 423 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 UBXN2AP68543 259 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 MRPS9P82933 396 aaKnown RBP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 LRRC63Q05C16 580 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 COASYQ13057 564 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 TBX2Q13207 712 aaPredicted RBP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 BAATQ14032 418 aaPredicted RBP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 ARSHQ5FYA8 562 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 ARHGEF16Q5VV41 709 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 NSMFQ6X4W1 530 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 DYMQ7RTS9 669 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 GPBP1Q86WP2 473 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 IRF2BP1Q8IU81 584 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 IL31RAQ8NI17 732 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 NSUN6Q8TEA1 469 aaKnown RBP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 GPRASP2Q96D09 838 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 NACC1Q96RE7 527 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 HOMER2Q9NSB8 354 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 PANK4Q9NVE7 773 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 KCND2Q9NZV8 630 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 FBXO40Q9UH90 709 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 PCDHA2Q9Y5H9 948 aa10.61□□□□□ -0.71
APOBEC1-202ENST00000467171 ITIH6Q6UXX5 1313 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 KCNJ18B7U540 433 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 FGFR1OPO95684 399 aaKnown RBP10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 CCND2P30279 289 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 COPB2P35606 906 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 PMS1P54277 932 aaKnown RBP10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 MTMR1Q13613 665 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 GIT2Q14161 759 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 KCNJ12Q14500 433 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 KRT31Q15323 416 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 TCP11X2Q5H9J9 407 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 FAM26FQ5R3K3 315 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 DLK2Q6UY11 383 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 ILDR2Q71H61 639 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 FASTKD5Q7L8L6 764 aaKnown RBP10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 RIOX2Q8IUF8 465 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 CCDC112Q8NEF3 446 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 RDM1Q8NG50 284 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 TRIM47Q96LD4 638 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 INPP4AQ96PE3 977 aaPredicted RBP10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 IWS1Q96ST2 819 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 DUSP9Q99956 384 aaKnown RBP10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 UNC45AQ9H3U1 944 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 ELP3Q9H9T3 547 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 A1CFQ9NQ94 594 aaKnown RBP10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 PYCARDQ9ULZ3 195 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 ATAD5Q96QE3 1844 aa10.6□□□□□ -0.71
APOBEC1-202ENST00000467171 MYH7BA7E2Y1 1941 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 NRDCO43847 1150 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 SSBP05455 408 aaKnown RBP eCLIP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 NR3C2P08235 984 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 IDEP14735 1019 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 GAP43P17677 238 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 EIF2AK2P19525 551 aaKnown RBP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 SFPQP23246 707 aaKnown RBP eCLIP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 COPB1P53618 953 aaKnown RBP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 PSMC6P62333 389 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 FKBP1BP68106 108 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 CCZ1BP86790 482 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 CCZ1P86791 482 aaPredicted RBP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 LRMPQ12912 555 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 PABPC4Q13310 644 aaKnown RBP eCLIP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 ITGB3BPQ13352 177 aaPredicted RBP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 NOLC1Q14978 699 aaKnown RBP eCLIP10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 TREML2Q5T2D2 321 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 ANKRD40Q6AI12 368 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 ARMCX5Q6P1M9 558 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
APOBEC1-202ENST00000467171 CSGALNACT2Q8N6G5 542 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms