RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 KRT25Q7Z3Z0 450 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 SLC17A8Q8NDX2 589 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 NSUN7Q8NE18 718 aaKnown RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 PPTC7Q8NI37 304 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 HERVK_113Q902F9 699 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 EMID1Q96A84 441 aaPredicted RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 VWCEQ96DN2 955 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 SPATA33Q96N06 139 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 ZNF396Q96N95 335 aaPredicted RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 CTAGE1Q96RT6 745 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 CDX2Q99626 313 aaPredicted RBP7.5□□□□□ -1.21
UBXN4-205ENST00000467065 PBX4Q9BYU1 374 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 BCAS3Q9H6U6 928 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 TSHZ2Q9NRE2 1034 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 HDAC6Q9UBN7 1215 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 CFAP45Q9UL16 551 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 NOD1Q9Y239 953 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 CUL9Q8IWT3 2517 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 VCANP13611 3396 aa7.5□□□□□ -1.21
UBXN4-205ENST00000467065 ATG2AQ2TAZ0 1938 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 ZBBXA8MT70 800 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 MEIS2O14770 477 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 STX6O43752 255 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 F2P00734 622 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 FOSBP53539 338 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 SP4Q02446 784 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
UBXN4-205ENST00000467065 SEMA3FQ13275 785 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 CUL4AQ13619 759 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 GNPTABQ3T906 1256 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 CELF3Q5SZQ8 465 aaKnown RBP7.49□□□□□ -1.21
UBXN4-205ENST00000467065 KCNV1Q6PIU1 500 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 RPUSD2Q8IZ73 545 aaKnown RBP7.49□□□□□ -1.21
UBXN4-205ENST00000467065 BLIDQ8IZY5 108 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 PTCD2Q8WV60 388 aaKnown RBP7.49□□□□□ -1.21
UBXN4-205ENST00000467065 DHX38Q92620 1227 aaKnown RBP7.49□□□□□ -1.21
UBXN4-205ENST00000467065 TIFAQ96CG3 184 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 CDHR1Q96JP9 859 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 KATNAL1Q9BW62 490 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 MTIF3Q9H2K0 278 aaKnown RBP7.49□□□□□ -1.21
UBXN4-205ENST00000467065 MLXIPQ9HAP2 919 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 RIC8AQ9NPQ8 531 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 VPS54Q9P1Q0 977 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 PCDHA4Q9UN74 947 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 TELO2Q9Y4R8 837 aa7.49□□□□□ -1.21
UBXN4-205ENST00000467065 KIAA1671Q9BY89 1806 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 TMEM265A0A087WTH1 108 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 HAS3O00219 553 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 PIK3CDO00329 1044 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 STK25O00506 426 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 NOP56O00567 594 aaKnown RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 FIBPO43427 364 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 JAK2O60674 1132 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 LGALS2P05162 132 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 IQCF3P0C7M6 154 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 HOXD8P13378 290 aaPredicted RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 FOSL2P15408 326 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 ICAM3P32942 547 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 RABGGTBP53611 331 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 ZNF200P98182 395 aaPredicted RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 GUCY1B3Q02153 619 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 BFSP2Q13515 415 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 HIC1Q14526 733 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 NONOQ15233 471 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 RAB30Q15771 203 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 RALGAPA2Q2PPJ7 1873 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 PCNX4Q63HM2 1172 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 XRRA1Q6P2D8 792 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 SESTD1Q86VW0 696 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 TRIM50Q86XT4 487 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 C7orf31Q8N865 590 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 RETREG2Q8NC44 543 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 FBXO18Q8NFZ0 1043 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 MAFAQ8NHW3 353 aaPredicted RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 WNT8BQ93098 351 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 PGBD1Q96JS3 809 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 INPP4AQ96PE3 977 aaPredicted RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 RAB34Q9BZG1 259 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 FTOQ9C0B1 505 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 ZMYND12Q9H0C1 365 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 FOXP1Q9H334 677 aaPredicted RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 ZNF576Q9H609 170 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 CHMP5Q9NZZ3 219 aa7.48□□□□□ -1.21
UBXN4-205ENST00000467065 YBX2Q9Y2T7 364 aaKnown RBP7.48□□□□□ -1.21
UBXN4-205ENST00000467065 PRRC2BQ5JSZ5 2229 aaKnown RBP7.47□□□□□ -1.21
UBXN4-205ENST00000467065 ESYT2A0FGR8 921 aa7.47□□□□□ -1.21
UBXN4-205ENST00000467065 SPATA31C2B4DYI2 1134 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms