RNA–Protein interactions for RNA: ENST00000467045.5

COL21A1-206, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 2

Gene COL21A1, Length 2,291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-206ENST00000467045 CDHR1Q96JP9 859 aa13.18□□□□□ -0.3
COL21A1-206ENST00000467045 TIGD1Q96MW7 591 aa13.18□□□□□ -0.3
COL21A1-206ENST00000467045 MBOAT7Q96N66 472 aa13.18□□□□□ -0.3
COL21A1-206ENST00000467045 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
COL21A1-206ENST00000467045 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
COL21A1-206ENST00000467045 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 PFKFB1P16118 471 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
COL21A1-206ENST00000467045 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
COL21A1-206ENST00000467045 TTC38Q5R3I4 469 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 ZNF577Q9BSK1 485 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 GTPBP4Q9BZE4 634 aaKnown RBP13.17□□□□□ -0.3
COL21A1-206ENST00000467045 XPO4Q9C0E2 1151 aaKnown RBP13.17□□□□□ -0.3
COL21A1-206ENST00000467045 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
COL21A1-206ENST00000467045 MSH4O15457 936 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 DUSP11O75319 330 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 GGPS1O95749 300 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 PGK1P00558 417 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 GCFC2P16383 781 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 TPM4P67936 248 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 SETQ01105 290 aaPredicted RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 NCAPHQ15003 741 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 RILPL1Q5EBL4 403 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 NAP1L4Q99733 375 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 IKBKBO14920 756 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 MSCO60682 206 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 KCNA2P16389 499 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 KCNJ6P48051 423 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 CELF3Q5SZQ8 465 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 KIF18AQ8NI77 898 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 ABHD8Q96I13 439 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
COL21A1-206ENST00000467045 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
COL21A1-206ENST00000467045 DDX39AO00148 427 aaKnown RBP13.15□□□□□ -0.3
COL21A1-206ENST00000467045 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL21A1-206ENST00000467045 PPP6R2O75170 966 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 GH1P01241 217 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 GJB1P08034 283 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 ARHGAP1Q07960 439 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 NEDD9Q14511 834 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 U2AF1L4Q8WU68 220 aaKnown RBP13.15□□□□□ -0.3
COL21A1-206ENST00000467045 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 TELO2Q9Y4R8 837 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 FAM237AA0A1B0GTK4 181 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 MARCH6O60337 910 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 SMC2O95347 1197 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 SGPL1O95470 568 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 TFRCP02786 760 aaKnown RBP13.15□□□□□ -0.3
COL21A1-206ENST00000467045 BEX3Q00994 111 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 SP4Q02446 784 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 ARMCX5Q6P1M9 558 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 ETNPPLQ8TBG4 499 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 TMEM60Q9H2L4 133 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
COL21A1-206ENST00000467045 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 HPSEQ9Y251 543 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 Q9Y3F1 56 aa13.15□□□□□ -0.3
COL21A1-206ENST00000467045 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 BIN1O00499 593 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 GJA9P57773 515 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 CALCRLQ16602 461 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 E4F1Q66K89 784 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 AFG1LQ8WV93 481 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 HAS1Q92839 578 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 SLC5A5Q92911 643 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 KCNMB3Q9NPA1 279 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 FARP2O94887 1054 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 SFPQP23246 707 aaKnown RBP eCLIP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-206ENST00000467045 SYKP43405 635 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 PTPAQ15257 358 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 HSDL1Q3SXM5 330 aa13.14□□□□□ -0.31
COL21A1-206ENST00000467045 GNASQ5JWF2 1037 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms