RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 SPATC1Q76KD6 591 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 IFNL3Q8IZI9 196 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 LRRC47Q8N1G4 583 aaKnown RBP5.36□□□□□ -1.55
CCDC58-203ENST00000466854 Q8TCH9 128 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 ARMC5Q96C12 935 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 NBPF4Q96M43 638 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 CDK5RAP1Q96SZ6 601 aaKnown RBP5.36□□□□□ -1.55
CCDC58-203ENST00000466854 CDC6Q99741 560 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 CD244Q9BZW8 370 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 KATNBL1Q9H079 304 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 ARHGAP20Q9P2F6 1191 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 SLC4A7Q9Y6M7 1214 aa5.36□□□□□ -1.55
CCDC58-203ENST00000466854 TRAV20A0A0B4J274 112 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 ZNF623O75123 536 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 FBXO21O94952 628 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 ENO2P09104 434 aaPredicted RBP5.35□□□□□ -1.55
CCDC58-203ENST00000466854 DRC1Q96MC2 740 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 IPO9Q96P70 1041 aaKnown RBP5.35□□□□□ -1.55
CCDC58-203ENST00000466854 GNRHR2Q96P88 292 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 DEPDC7Q96QD5 511 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 ZNF747Q9BV97 191 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 SPATA9Q9BWV2 254 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 CCDC113Q9H0I3 377 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 DEF6Q9H4E7 631 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 SRRDQ9UH36 339 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 PTPN22Q9Y2R2 807 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 TRAF6Q9Y4K3 522 aa5.35□□□□□ -1.55
CCDC58-203ENST00000466854 FAM47E-STBD1D6RA91 191 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 SLPIP03973 132 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 ZNF888P0CJ79 500 aaPredicted RBP5.34□□□□□ -1.55
CCDC58-203ENST00000466854 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 SPDYAQ5MJ70 313 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 SORCS2Q96PQ0 1159 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 TACO1Q9BSH4 297 aaKnown RBP5.34□□□□□ -1.55
CCDC58-203ENST00000466854 SEC61A2Q9H9S3 476 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 MSRB2Q9Y3D2 182 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 NUB1Q9Y5A7 615 aa5.34□□□□□ -1.55
CCDC58-203ENST00000466854 KDM2BQ8NHM5 1336 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 MUSKO15146 869 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 FOXS1O43638 330 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 ADCY3O60266 1144 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
CCDC58-203ENST00000466854 IGSF3O75054 1194 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 ACVRL1P37023 503 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 TCTN3Q6NUS6 607 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 REXO1L1PQ8IX06 675 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 ZNF669Q96BR6 464 aaPredicted RBP5.33□□□□□ -1.56
CCDC58-203ENST00000466854 SLC39A2Q9NP94 309 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 TCAF1Q9Y4C2 921 aa5.33□□□□□ -1.56
CCDC58-203ENST00000466854 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
CCDC58-203ENST00000466854 FAM221BA6H8Z2 402 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 H0Y858 1186 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 WNT9AO14904 365 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 DBPQ10586 325 aaPredicted RBP5.32□□□□□ -1.56
CCDC58-203ENST00000466854 BMS1Q14692 1282 aaKnown RBP5.32□□□□□ -1.56
CCDC58-203ENST00000466854 LRRC37BQ96QE4 947 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 LMF1Q96S06 567 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 DNAJC7Q99615 494 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 ALG1Q9BT22 464 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 VPS11Q9H270 941 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 SNTG2Q9NY99 539 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 SRPK3Q9UPE1 567 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 TESMINQ9Y4I5 508 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 SHROOM4Q9ULL8 1493 aa5.32□□□□□ -1.56
CCDC58-203ENST00000466854 FAM90A27PA6NNH2 459 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 AMHP03971 560 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 AMY2AP04746 511 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 C6orf222P0C671 652 aaPredicted RBP5.31□□□□□ -1.56
CCDC58-203ENST00000466854 FAM153BP0C7A2 387 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 PTPN1P18031 435 aaKnown RBP5.31□□□□□ -1.56
CCDC58-203ENST00000466854 AMY2BP19961 511 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 TOP3AQ13472 1001 aaPredicted RBP5.31□□□□□ -1.56
CCDC58-203ENST00000466854 SERINC3Q13530 473 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 USP10Q14694 798 aaKnown RBP5.31□□□□□ -1.56
CCDC58-203ENST00000466854 FOXB2Q5VYV0 432 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 OSBPL2Q9H1P3 480 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 ZSWIM4Q9H7M6 989 aa5.31□□□□□ -1.56
CCDC58-203ENST00000466854 MAN2B1O00754 1011 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 SUV39H1O43463 412 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 POLD1P28340 1107 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 GDF5P43026 501 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 PAK1Q13153 545 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 RASA3Q14644 834 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 FAM209AQ5JX71 171 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 BTBD8Q5XKL5 378 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 ARHGAP36Q6ZRI8 547 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 ZFPM1Q8IX07 1006 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 IFNL2Q8IZJ0 200 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 ZBTB38Q8NAP3 1195 aaPredicted RBP5.3□□□□□ -1.56
CCDC58-203ENST00000466854 PCDH19Q8TAB3 1148 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 UBXN4Q92575 508 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 NEIL1Q96FI4 390 aaPredicted RBP5.3□□□□□ -1.56
CCDC58-203ENST00000466854 SEMA4AQ9H3S1 761 aa5.3□□□□□ -1.56
CCDC58-203ENST00000466854 TRBV23-1A0A0A0MS06 115 aa5.29□□□□□ -1.56
CCDC58-203ENST00000466854 ESYT3A0FGR9 886 aa5.29□□□□□ -1.56
CCDC58-203ENST00000466854 ARVCFO00192 962 aa5.29□□□□□ -1.56
CCDC58-203ENST00000466854 CYR61O00622 381 aa5.29□□□□□ -1.56
CCDC58-203ENST00000466854 GPR19Q15760 415 aa5.29□□□□□ -1.56
CCDC58-203ENST00000466854 NFE2L2Q16236 605 aa5.29□□□□□ -1.56
CCDC58-203ENST00000466854 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms