RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 FBLN7Q53RD9 439 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 PRAMEF18Q5VWM3 479 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 CD276Q5ZPR3 534 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 LCNL1Q6ZST4 164 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 KIAA0907Q7Z7F0 614 aaPredicted RBP5.7□□□□□ -1.5
CALD1-214ENST00000466704 LRRTM3Q86VH5 581 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 CHST14Q8NCH0 376 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 BOCQ9BWV1 1114 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 ARHGAP28Q9P2N2 729 aa5.7□□□□□ -1.5
CALD1-214ENST00000466704 A0A1B0GTL3 188 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 SH3D21A4FU49 640 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 KPNA6O60684 536 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 SARSP49591 514 aaKnown RBP5.69□□□□□ -1.5
CALD1-214ENST00000466704 PFKPQ01813 784 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 DLX2Q07687 328 aaPredicted RBP5.69□□□□□ -1.5
CALD1-214ENST00000466704 PLEKHG4Q58EX7 1191 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 DALRD3Q5D0E6 543 aaKnown RBP5.69□□□□□ -1.5
CALD1-214ENST00000466704 PKN3Q6P5Z2 889 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 LIPIQ6XZB0 460 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 NOSTRINQ8IVI9 506 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 KCNH7Q9NS40 1196 aa5.69□□□□□ -1.5
CALD1-214ENST00000466704 SPATA6Q9NWH7 488 aaPredicted RBP5.69□□□□□ -1.5
CALD1-214ENST00000466704 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.68□□□□□ -1.5
CALD1-214ENST00000466704 SASH1O94885 1247 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 FBXO21O94952 628 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 C4BPAP04003 597 aaKnown RBP5.68□□□□□ -1.5
CALD1-214ENST00000466704 RPL13P26373 211 aaKnown RBP5.68□□□□□ -1.5
CALD1-214ENST00000466704 GLRBP48167 497 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 KCNC1P48547 511 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 DBPQ10586 325 aaPredicted RBP5.68□□□□□ -1.5
CALD1-214ENST00000466704 TMEM132BQ14DG7 1078 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 SKIDA1Q1XH10 827 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 SPOCD1Q6ZMY3 1216 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 PROSER1Q86XN7 944 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 SP8Q8IXZ3 490 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 AHI1Q8N157 1196 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 CARFQ8N187 725 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 DTX3Q8N9I9 347 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 TP53I13Q8NBR0 393 aaPredicted RBP5.68□□□□□ -1.5
CALD1-214ENST00000466704 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 SLC39A2Q9NP94 309 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 ARHGAP20Q9P2F6 1191 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 WASF3Q9UPY6 502 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 ZKSCAN5Q9Y2L8 839 aa5.68□□□□□ -1.5
CALD1-214ENST00000466704 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 ZNF839A8K0R7 811 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 CBX4O00257 560 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 TRIM13O60858 407 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 MECP2P51608 486 aaKnown RBP5.67□□□□□ -1.5
CALD1-214ENST00000466704 GYS2P54840 703 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 SLURP1P55000 103 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 PHF19Q5T6S3 580 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 FSTL4Q6MZW2 842 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 TRMT10BQ6PF06 316 aaKnown RBP5.67□□□□□ -1.5
CALD1-214ENST00000466704 OTOP1Q7RTM1 612 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 PPM1KQ8N3J5 372 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
CALD1-214ENST00000466704 TARS2Q9BW92 718 aaKnown RBP5.67□□□□□ -1.5
CALD1-214ENST00000466704 ZCCHC4Q9H5U6 513 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 L2HGDHQ9H9P8 463 aa5.67□□□□□ -1.5
CALD1-214ENST00000466704 H7C1D1 291 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 TRAF5O00463 557 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.5
CALD1-214ENST00000466704 FOXP2O15409 715 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 GAS7O60861 476 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 CYP1A1P04798 512 aaPredicted RBP5.66□□□□□ -1.5
CALD1-214ENST00000466704 ZBTB48P10074 688 aaPredicted RBP5.66□□□□□ -1.5
CALD1-214ENST00000466704 MYCLP1P12525 358 aaPredicted RBP5.66□□□□□ -1.5
CALD1-214ENST00000466704 PTGS1P23219 599 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 KIF11P52732 1056 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 HERVK_113P62684 666 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 ZNF174Q15697 407 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 PRR31Q5SQ13 230 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 MARCH10Q8NA82 808 aaPredicted RBP5.66□□□□□ -1.5
CALD1-214ENST00000466704 HIPK4Q8NE63 616 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 IGDCC4Q8TDY8 1250 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 ADAMTS17Q8TE56 1095 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 PCIF1Q9H4Z3 704 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 LUC7LQ9NQ29 371 aaKnown RBP5.66□□□□□ -1.5
CALD1-214ENST00000466704 IFT57Q9NWB7 429 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 B4GALT6Q9UBX8 382 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 ZFP69BQ9UJL9 534 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 B3GALT1Q9Y5Z6 326 aa5.66□□□□□ -1.5
CALD1-214ENST00000466704 MMEP08473 750 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 ZNF28P17035 718 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 POU3F2P20265 443 aaPredicted RBP5.65□□□□□ -1.5
CALD1-214ENST00000466704 AOAHP28039 575 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 SDHAP31040 664 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 IL13P35225 146 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 MLLT6P55198 1093 aaPredicted RBP5.65□□□□□ -1.5
CALD1-214ENST00000466704 SART3Q15020 963 aaKnown RBP5.65□□□□□ -1.5
CALD1-214ENST00000466704 SEC23AQ15436 765 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 SMAD2Q15796 467 aaKnown RBP5.65□□□□□ -1.5
CALD1-214ENST00000466704 TM4SF20Q53R12 229 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 MCTP2Q6DN12 878 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 STPG3Q8N7X2 389 aa5.65□□□□□ -1.5
CALD1-214ENST00000466704 WDR48Q8TAF3 677 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms