RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 TACO1Q9BSH4 297 aaKnown RBP6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 CARD11Q9BXL7 1154 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 CD244Q9BZW8 370 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 TRAF6Q9Y4K3 522 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 WNT9AO14904 365 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 PDPK1O15530 556 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 CUTAO60888 179 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 NAT1P18440 290 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 POLD1P28340 1107 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 GPR19Q15760 415 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 BTBD8Q5XKL5 378 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 ARHGAP36Q6ZRI8 547 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 SH3RF2Q8TEC5 729 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 IPO9Q96P70 1041 aaKnown RBP6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 SORCS2Q96PQ0 1159 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 LRRC37BQ96QE4 947 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 VPS11Q9H270 941 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 SLC39A2Q9NP94 309 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 SRPK3Q9UPE1 567 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 MSRB2Q9Y3D2 182 aa6.22□□□□□ -1.41
CHMP2B-202ENST00000466696 TCRBV5S4A2TA0A5A2 114 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 CYR61O00622 381 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 FZD7O75084 574 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 PTPN1P18031 435 aaKnown RBP6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 GJA4P35212 333 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 SUMO1P63165 101 aaKnown RBP6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 MTERF2Q49AM1 385 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 EP400NLQ6ZTU2 488 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 USP51Q70EK9 711 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 SPATC1Q76KD6 591 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 GIMAP8Q8ND71 665 aaPredicted RBP6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 FBXW5Q969U6 566 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 GNRHR2Q96P88 292 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 ZNF747Q9BV97 191 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 CATSPERZQ9NTU4 200 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 RIC8BQ9NVN3 520 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 ARHGAP28Q9P2N2 729 aa6.21□□□□□ -1.42
CHMP2B-202ENST00000466696 TRBV23-1A0A0A0MS06 115 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 GSTA4O15217 222 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 ADCY3O60266 1144 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 AMHP03971 560 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 RBM25P49756 843 aaKnown RBP6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 RAC3P60763 192 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 SPDYAQ5MJ70 313 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 TCTN3Q6NUS6 607 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 Q8N1X5 172 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 NEIL1Q96FI4 390 aaPredicted RBP6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 SCAND2PQ9GZW5 306 aaPredicted RBP6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 ZFR2Q9UPR6 939 aaKnown RBP6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 ATP23Q9Y6H3 246 aa6.2□□□□□ -1.42
CHMP2B-202ENST00000466696 ESYT3A0FGR9 886 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 FAM90A27PA6NNH2 459 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 FOXS1O43638 330 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 ZNF888P0CJ79 500 aaPredicted RBP6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 ACVRL1P37023 503 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 ST5P78524 1137 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 GUCY1A3Q02108 690 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 SSRP1Q08945 709 aaKnown RBP6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 TOP3AQ13472 1001 aaPredicted RBP6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 ZMAT1Q5H9K5 638 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 FIGNQ5HY92 759 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 C16orf59Q7L2K0 433 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 TAX1BP1Q86VP1 789 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 ZBTB38Q8NAP3 1195 aaPredicted RBP6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 PCDH19Q8TAB3 1148 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 PCDHA8Q9Y5H6 950 aa6.19□□□□□ -1.42
CHMP2B-202ENST00000466696 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 ARVCFO00192 962 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 PDE6AP16499 860 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 GABREP78334 506 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 PRKD1Q15139 912 aaPredicted RBP6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 CRY1Q16526 586 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 NBPF6Q5VWK0 638 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 OSTM1Q86WC4 334 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 SCYL1Q96KG9 808 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 NBPF4Q96M43 638 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 IGSF5Q9NSI5 407 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 FBXO10Q9UK96 956 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 PTPN22Q9Y2R2 807 aa6.18□□□□□ -1.42
CHMP2B-202ENST00000466696 MAN2B1O00754 1011 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 AMY2AP04746 511 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 C6orf222P0C671 652 aaPredicted RBP6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 PYGMP11217 842 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 AMY2BP19961 511 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 PTGS1P23219 599 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 ETV4P43268 484 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 HMGA2P52926 109 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 ZC3H6P61129 1189 aaKnown RBP6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 FAM47CQ5HY64 1035 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 FAM209AQ5JX71 171 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 CXXC5Q7LFL8 322 aaKnown RBP6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 PTRH1Q86Y79 214 aaKnown RBP6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 INCENPQ9NQS7 918 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 PFDN2Q9UHV9 154 aa6.17□□□□□ -1.42
CHMP2B-202ENST00000466696 APPP05067 770 aa6.16□□□□□ -1.42
CHMP2B-202ENST00000466696 SRGAP2CP0DJJ0 459 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms