RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 MAFBQ9Y5Q3 323 aaPredicted RBP10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 UMODL1Q5DID0 1318 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 NRCAMQ92823 1304 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRIOBPQ9H2D6 2365 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 C17orf102A2RUQ5 167 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 WDR64B1ANS9 1081 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 WNT7AO00755 349 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 CCNT1O60563 726 aaKnown RBP10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 GAS7O60861 476 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 CAND2O75155 1236 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 GNAT1P11488 350 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 GJB2P29033 226 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 SFNP31947 248 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 CYP2C18P33260 490 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 RFC2P35250 354 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRAPPC10P48553 1259 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 STAT5BP51692 787 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 EPHB4P54760 987 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 GUCY1B3Q02153 619 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 FPGSQ05932 587 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 PPP2R5CQ13362 524 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 ORC2Q13416 577 aaPredicted RBP10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 PPIGQ13427 754 aaKnown RBP eCLIP10.71□□□□□ -0.691e-6■■□□□ 11.4
SDCCAG3-208ENST00000466579 BFSP2Q13515 415 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 PLCB4Q15147 1175 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 HABP4Q5JVS0 413 aaKnown RBP10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 LRCH2Q5VUJ6 765 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 RPAINQ86UA6 219 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 CCDC60Q8IWA6 550 aaPredicted RBP10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 TMEM199Q8N511 208 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 LMBR1Q8WVP7 490 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 GLG1Q92896 1179 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 INTS4Q96HW7 963 aaKnown RBP10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 UBE2OQ9C0C9 1292 aaKnown RBP10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 UNC45AQ9H3U1 944 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 AZI2Q9H6S1 392 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 VAV3Q9UKW4 847 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 IGSF9BQ9UPX0 1349 aa10.71□□□□□ -0.69
SDCCAG3-208ENST00000466579 LAMA3Q16787 3333 aa10.71□□□□□ -0.7
SDCCAG3-208ENST00000466579 SCN5AQ14524 2016 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 KIF28PB7ZC32 967 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 DDX39AO00148 427 aaKnown RBP10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 TREHO43280 583 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 PARNO95453 639 aaKnown RBP10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 PSAPP07602 524 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 ATP4AP20648 1035 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 JAK3P52333 1124 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 FOSBP53539 338 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZNF200P98182 395 aaPredicted RBP10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 SPIRE1Q08AE8 756 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 GPNMBQ14956 572 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 MARCH8Q5T0T0 291 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 RASIP1Q5U651 963 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 FAM160B1Q5W0V3 765 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 C16orf59Q7L2K0 433 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 NOSTRINQ8IVI9 506 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 TDHQ8IZJ6 230 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 CCDC155Q8N6L0 562 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 ATP8B4Q8TF62 1192 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 TNPO1Q92973 898 aaKnown RBP10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 ATP6V0A1Q93050 837 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 WNT8BQ93098 351 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 MTMR9Q96QG7 549 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 UIMC1Q96RL1 719 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 PPP1R12CQ9BZL4 782 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 IL23AQ9NPF7 189 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZNF302Q9NR11 478 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 DISC1Q9NRI5 854 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 SETD4Q9NVD3 440 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
SDCCAG3-208ENST00000466579 COL1A2P08123 1366 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 RRN3P2A6NIE6 340 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZBTB42B2RXF5 422 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 K7ELQ4 463 aaPredicted RBP10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 HBP1O60381 514 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 CXCL10P02778 98 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 PFKMP08237 780 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 CKBP12277 381 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 INSRRP14616 1297 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 CSF2RAP15509 400 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 CHMP4BP1P59074 171 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 GRIK4Q16099 956 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 FAM26DQ5JW98 314 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 TMEM240Q5SV17 173 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 SWSAP1Q6NVH7 229 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 TAF2Q6P1X5 1199 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 SLFN12Q8IYM2 578 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 GJA10Q969M2 543 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 TCEAL9Q9UHQ7 104 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 NOD1Q9Y239 953 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 TET1Q8NFU7 2136 aa10.69□□□□□ -0.7
SDCCAG3-208ENST00000466579 BACH1O14867 736 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms