RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ZNF713Q8N859 430 aaPredicted RBP21.9■■□□□ 1.1
COL9A3-206ENST00000466532 ANO3Q9BYT9 981 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 KCNH7Q9NS40 1196 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 SLC9A2Q9UBY0 812 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 KIAA1671Q9BY89 1806 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 TTC3P53804 2025 aa21.89■■□□□ 1.1
COL9A3-206ENST00000466532 STXBP3O00186 592 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 FOSP01100 380 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-206ENST00000466532 GHRP10912 638 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 IGBP1P78318 339 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 MGAT3Q09327 533 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 CYP2W1Q8TAV3 490 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 SAMD11Q96NU1 681 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 SDF4Q9BRK5 362 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 AZI2Q9H6S1 392 aa21.89■■□□□ 1.09
COL9A3-206ENST00000466532 NAP1L2Q9ULW6 460 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-206ENST00000466532 MBLAC1A4D2B0 266 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-206ENST00000466532 SMCO2A6NFE2 343 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 HMGB1P09429 215 aaKnown RBP21.88■■□□□ 1.09
COL9A3-206ENST00000466532 ARP10275 920 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 CDC27P30260 824 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 EPC2Q52LR7 807 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 MARCH8Q5T0T0 291 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 DNAJB3Q8WWF6 145 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 PCYT2Q99447 389 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 TMEM260Q9NX78 707 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 BARHL2Q9NY43 387 aa21.88■■□□□ 1.09
COL9A3-206ENST00000466532 NFASCO94856 1347 aa21.87■■□□□ 1.09
COL9A3-206ENST00000466532 INSRRP14616 1297 aa21.87■■□□□ 1.09
COL9A3-206ENST00000466532 FGD1P98174 961 aa21.87■■□□□ 1.09
COL9A3-206ENST00000466532 LPIN1Q14693 890 aa21.87■■□□□ 1.09
COL9A3-206ENST00000466532 CEP55Q53EZ4 464 aa21.87■■□□□ 1.09
COL9A3-206ENST00000466532 FAM217BQ9NTX9 383 aaPredicted RBP21.87■■□□□ 1.09
COL9A3-206ENST00000466532 CDY2AQ9Y6F7 541 aa21.87■■□□□ 1.09
COL9A3-206ENST00000466532 RRN3P2A6NIE6 340 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 RCAN1P53805 252 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 ACTR2P61160 394 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 AP3B2Q13367 1082 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 ZBTB10Q96DT7 871 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 FAM49AQ9H0Q0 323 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-206ENST00000466532 GLT8D2Q9H1C3 349 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 AGO4Q9HCK5 861 aaKnown RBP21.86■■□□□ 1.09
COL9A3-206ENST00000466532 TRPC6Q9Y210 931 aa21.86■■□□□ 1.09
COL9A3-206ENST00000466532 CPA1P15085 419 aa21.85■■□□□ 1.09
COL9A3-206ENST00000466532 ZNF76P36508 570 aa21.85■■□□□ 1.09
COL9A3-206ENST00000466532 SREBF1P36956 1147 aa21.85■■□□□ 1.09
COL9A3-206ENST00000466532 CLK2P49760 499 aaKnown RBP21.85■■□□□ 1.09
COL9A3-206ENST00000466532 METAP2P50579 478 aaKnown RBP eCLIP21.85■■□□□ 1.09
COL9A3-206ENST00000466532 MRPS6P82932 125 aaKnown RBP21.85■■□□□ 1.09
COL9A3-206ENST00000466532 ITGB3BPQ13352 177 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-206ENST00000466532 PTPROQ16827 1216 aa21.85■■□□□ 1.09
COL9A3-206ENST00000466532 FBXO47Q5MNV8 452 aa21.85■■□□□ 1.09
COL9A3-206ENST00000466532 TMEM192Q8IY95 271 aa21.85■■□□□ 1.09
COL9A3-206ENST00000466532 TNPO1Q92973 898 aaKnown RBP21.85■■□□□ 1.09
COL9A3-206ENST00000466532 MEIS1O00470 390 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 RPLP2P05387 115 aaKnown RBP21.84■■□□□ 1.09
COL9A3-206ENST00000466532 ADD1P35611 737 aaKnown RBP21.84■■□□□ 1.09
COL9A3-206ENST00000466532 STAT5BP51692 787 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 APOBRQ0VD83 1088 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 GPM6BQ13491 265 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 PLCB4Q15147 1175 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 TSHZ1Q6ZSZ6 1077 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 PLPPR4Q7Z2D5 763 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 MRPL38Q96DV4 380 aaKnown RBP21.84■■□□□ 1.09
COL9A3-206ENST00000466532 IL17RAQ96F46 866 aa21.84■■□□□ 1.09
COL9A3-206ENST00000466532 UBE2ZQ9H832 354 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-206ENST00000466532 CCDC196A0A1B0GTZ2 297 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 H3BNC9 293 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 DDX39AO00148 427 aaKnown RBP21.83■■□□□ 1.09
COL9A3-206ENST00000466532 PFKFB3Q16875 520 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-206ENST00000466532 IER5Q5VY09 327 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 JAKMIP3Q5VZ66 844 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 Q6ZUG5 572 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 FIBCD1Q8N539 461 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 TRAPPC12Q8WVT3 735 aa21.83■■□□□ 1.09
COL9A3-206ENST00000466532 JAKMIP1Q96N16 626 aaKnown RBP21.83■■□□□ 1.09
COL9A3-206ENST00000466532 M0QZ92 97 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 ENPP3O14638 875 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 SCG2P13521 617 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 TMEM62Q0P6H9 643 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 NIPA1Q7RTP0 329 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 KCNB2Q92953 911 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 BRF1Q92994 677 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 PCDHA2Q9Y5H9 948 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 TRPV2Q9Y5S1 764 aa21.82■■□□□ 1.08
COL9A3-206ENST00000466532 ADGRA3Q8IWK6 1321 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-206ENST00000466532 POTEB3A0JP26 581 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 ATG7O95352 703 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 COL9A1P20849 921 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 CD52P31358 61 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 HSPA4P34932 840 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 CTNNB1P35222 781 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 TIGD5Q53EQ6 642 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 BLOC1S2Q6QNY1 142 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 POTEBQ6S5H4 581 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 PLA2G4DQ86XP0 818 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 AGO3Q9H9G7 860 aaKnown RBP21.81■■□□□ 1.08
COL9A3-206ENST00000466532 SNX14Q9Y5W7 946 aa21.81■■□□□ 1.08
COL9A3-206ENST00000466532 MYO7AQ13402 2215 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms