RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SERINC5Q86VE9 423 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 CCDC60Q8IWA6 550 aaPredicted RBP29.32■■■□□ 2.28
SMC4-206ENST00000465903 CAGE1Q8TC20 777 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 AFAP1L1Q8TED9 768 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 AZI2Q9H6S1 392 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 IQCF3P0C7M6 154 aa29.31■■■□□ 2.28
SMC4-206ENST00000465903 PLCB4Q15147 1175 aa29.31■■■□□ 2.28
SMC4-206ENST00000465903 MIS18BP1Q6P0N0 1132 aa29.31■■■□□ 2.28
SMC4-206ENST00000465903 LMBR1Q8WVP7 490 aa29.31■■■□□ 2.28
SMC4-206ENST00000465903 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.31■■■□□ 2.288e-18■□□□□ 10.5
SMC4-206ENST00000465903 IL23AQ9NPF7 189 aa29.31■■■□□ 2.28
SMC4-206ENST00000465903 NRCAMQ92823 1304 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 CCNT1O60563 726 aaKnown RBP29.3■■■□□ 2.28
SMC4-206ENST00000465903 GAS7O60861 476 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 GCFC2P16383 781 aaKnown RBP29.3■■■□□ 2.28
SMC4-206ENST00000465903 FXR1P51114 621 aaKnown RBP eCLIP29.3■■■□□ 2.28
SMC4-206ENST00000465903 TMEM240Q5SV17 173 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 LRCH2Q5VUJ6 765 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 SWSAP1Q6NVH7 229 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 B3GNT9Q6UX72 402 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 SMAP1Q8IYB5 467 aaPredicted RBP29.3■■■□□ 2.28
SMC4-206ENST00000465903 RETREG2Q8NC44 543 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 TEKT3Q9BXF9 490 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 UNC45AQ9H3U1 944 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 KCNMB3Q9NPA1 279 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 ZNF302Q9NR11 478 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 EVPLQ92817 2033 aa29.3■■■□□ 2.28
SMC4-206ENST00000465903 WNT7AO00755 349 aa29.29■■■□□ 2.28
SMC4-206ENST00000465903 CKBP12277 381 aa29.29■■■□□ 2.28
SMC4-206ENST00000465903 ATP4AP20648 1035 aa29.29■■■□□ 2.28
SMC4-206ENST00000465903 SAFBQ15424 915 aaKnown RBP eCLIP29.29■■■□□ 2.28
SMC4-206ENST00000465903 TRAF7Q6Q0C0 670 aa29.29■■■□□ 2.28
SMC4-206ENST00000465903 CCDC155Q8N6L0 562 aa29.29■■■□□ 2.28
SMC4-206ENST00000465903 NAP1L4Q99733 375 aaKnown RBP29.29■■■□□ 2.28
SMC4-206ENST00000465903 PCDHA10Q9Y5I2 948 aa29.29■■■□□ 2.28
SMC4-206ENST00000465903 MAFBQ9Y5Q3 323 aaPredicted RBP29.29■■■□□ 2.28
SMC4-206ENST00000465903 SOX1O00570 391 aaPredicted RBP29.28■■■□□ 2.28
SMC4-206ENST00000465903 BACH1O14867 736 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 GNAT1P11488 350 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 INSRRP14616 1297 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 PPFIA1Q13136 1202 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 GPNMBQ14956 572 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 GRIK4Q16099 956 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 LRIT3Q3SXY7 679 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 MARCH8Q5T0T0 291 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 FAM160B1Q5W0V3 765 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 DISC1Q9NRI5 854 aa29.28■■■□□ 2.28
SMC4-206ENST00000465903 WDR64B1ANS9 1081 aa29.27■■■□□ 2.28
SMC4-206ENST00000465903 PSAPP07602 524 aa29.27■■■□□ 2.28
SMC4-206ENST00000465903 SLC26A2P50443 739 aa29.27■■■□□ 2.28
SMC4-206ENST00000465903 ZNF365Q70YC5 407 aa29.27■■■□□ 2.28
SMC4-206ENST00000465903 HAS1Q92839 578 aa29.27■■■□□ 2.28
SMC4-206ENST00000465903 FOXP1Q9H334 677 aaPredicted RBP29.27■■■□□ 2.28
SMC4-206ENST00000465903 LAMA3Q16787 3333 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 SELPP16109 830 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 GJB2P29033 226 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 ZNF618Q5T7W0 954 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 POTEDQ86YR6 584 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 RPUSD2Q8IZ73 545 aaKnown RBP29.26■■■□□ 2.27
SMC4-206ENST00000465903 FAM20AQ96MK3 541 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 GABBR1Q9UBS5 961 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 TCEAL9Q9UHQ7 104 aa29.26■■■□□ 2.27
SMC4-206ENST00000465903 POTEB3A0JP26 581 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 MBLAC1A4D2B0 266 aaPredicted RBP29.25■■■□□ 2.27
SMC4-206ENST00000465903 KIF28PB7ZC32 967 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 RBAK-RBAKDNI3L0D1 243 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 TBX3O15119 743 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 CHMP2AO43633 222 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 CUL4AQ13619 759 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 PDXDC2PQ6P474 469 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 POTEBQ6S5H4 581 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 LRRC8DQ7L1W4 858 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 TRPC6Q9Y210 931 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 SAMM50Q9Y512 469 aa29.25■■■□□ 2.27
SMC4-206ENST00000465903 SFNP31947 248 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 RFC2P35250 354 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 RASIP1Q5U651 963 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 PSRC1Q6PGN9 363 aaPredicted RBP29.24■■■□□ 2.27
SMC4-206ENST00000465903 RUFY4Q6ZNE9 571 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 DEFB128Q7Z7B8 93 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 ATP8B4Q8TF62 1192 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 ZBTB10Q96DT7 871 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 VAV3Q9UKW4 847 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 LOXHD1Q8IVV2 1947 aa29.24■■■□□ 2.27
SMC4-206ENST00000465903 IGSF9BQ9UPX0 1349 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 RRN3P2A6NIE6 340 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 FGBP02675 491 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 THPOP40225 353 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 JAK3P52333 1124 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 IGBP1P78318 339 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 RDM1Q8NG50 284 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 TRAPPC12Q8WVT3 735 aa29.23■■■□□ 2.27
SMC4-206ENST00000465903 RNPC3Q96LT9 517 aaKnown RBP29.23■■■□□ 2.27
SMC4-206ENST00000465903 SIP14410 1827 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 EML1O00423 815 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 HBP1O60381 514 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 U2AF2P26368 475 aaKnown RBP eCLIP29.22■■■□□ 2.273e-7■□□□□ 10.5
SMC4-206ENST00000465903 MBTPS1Q14703 1052 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 UGCGQ16739 394 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 MIER3Q7Z3K6 550 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms