RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 WDR64B1ANS9 1081 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 TBX3O15119 743 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 NEMFO60524 1076 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 BAG4O95429 457 aaKnown RBP13.97□□□□□ -0.17
CHPF2-202ENST00000465601 TIMP1P01033 207 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 PSAPP07602 524 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 CYP2C18P33260 490 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
CHPF2-202ENST00000465601 TOB1P50616 345 aaPredicted RBP13.97□□□□□ -0.17
CHPF2-202ENST00000465601 NBR1Q14596 966 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 CALCRLQ16602 461 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 TTC38Q5R3I4 469 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 FAM160B1Q5W0V3 765 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 PDXDC2PQ6P474 469 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 PLPPR4Q7Z2D5 763 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 MIER3Q7Z3K6 550 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 BADQ92934 168 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 TMEM60Q9H2L4 133 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 ZNF302Q9NR11 478 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 GABBR1Q9UBS5 961 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 NOL7Q9UMY1 257 aaKnown RBP13.97□□□□□ -0.17
CHPF2-202ENST00000465601 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
CHPF2-202ENST00000465601 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
CHPF2-202ENST00000465601 EML1O00423 815 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 HSP90AA1P07900 732 aaKnown RBP13.96□□□□□ -0.17
CHPF2-202ENST00000465601 ATP4AP20648 1035 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 PDCP20941 246 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 SYT1P21579 422 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 SFNP31947 248 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 TRAPPC10P48553 1259 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 JAK3P52333 1124 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 PLCB4Q15147 1175 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 TRMT1LQ7Z2T5 733 aaKnown RBP13.96□□□□□ -0.17
CHPF2-202ENST00000465601 SLFN12Q8IYM2 578 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 ATP6V0A1Q93050 837 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.17
CHPF2-202ENST00000465601 HIPK3Q9H422 1215 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 VAV3Q9UKW4 847 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 TRPC6Q9Y210 931 aa13.96□□□□□ -0.17
CHPF2-202ENST00000465601 SCN5AQ14524 2016 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 TREHO43280 583 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 GNAT1P11488 350 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 INSRRP14616 1297 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 HOXC8P31273 242 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 TXKP42681 527 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 CCL23P55773 120 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 IGBP1P78318 339 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 PPP2R5CQ13362 524 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 FERMT3Q86UX7 667 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 CKAP2LQ8IYA6 745 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 RDM1Q8NG50 284 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 LMBR1Q8WVP7 490 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
CHPF2-202ENST00000465601 GDF15Q99988 308 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 PCDHB6Q9Y5E3 794 aa13.95□□□□□ -0.18
CHPF2-202ENST00000465601 MAFBQ9Y5Q3 323 aaPredicted RBP13.95□□□□□ -0.18
CHPF2-202ENST00000465601 NRCAMQ92823 1304 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 SLC26A2P50443 739 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 ADAM17P78536 824 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 PTK7Q13308 1070 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 GRIK4Q16099 956 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 UGCGQ16739 394 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 NCAPH2Q6IBW4 605 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 ATP8B4Q8TF62 1192 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 WNT8BQ93098 351 aa13.94□□□□□ -0.18
CHPF2-202ENST00000465601 TTC12Q9H892 705 aaPredicted RBP13.94□□□□□ -0.18
CHPF2-202ENST00000465601 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
CHPF2-202ENST00000465601 ZNF862O60290 1169 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 HBP1O60381 514 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 OR52Z1P0C646 297 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 SPIRE1Q08AE8 756 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 ORC2Q13416 577 aaPredicted RBP13.93□□□□□ -0.18
CHPF2-202ENST00000465601 BFSP2Q13515 415 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 MFSD5Q6N075 450 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 SERINC5Q86VE9 423 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 C4orf32Q8N8J7 132 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 RETREG2Q8NC44 543 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 BANK1Q8NDB2 785 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
CHPF2-202ENST00000465601 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 SCLYQ96I15 445 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
CHPF2-202ENST00000465601 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
CHPF2-202ENST00000465601 IGSF9BQ9UPX0 1349 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 RRN3P2A6NIE6 340 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 STX6O43752 255 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 CSF2RAP15509 400 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms