RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SH3GLB2Q9NR46 395 aa24.79■■□□□ 1.56
LIME1-203ENST00000465591 CPLX1O14810 134 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 ATG7O95352 703 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 MCTP2Q6DN12 878 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 TRIM22Q8IYM9 498 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 DBF4BQ8NFT6 615 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 IL17RAQ96F46 866 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 PRUNE2Q8WUY3 3088 aa24.78■■□□□ 1.56
LIME1-203ENST00000465591 DEXIO95424 95 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 CA3P07451 260 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 KCNJ6P48051 423 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 NLRP5P59047 1200 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 MKRN4PQ13434 485 aaPredicted RBP24.77■■□□□ 1.56
LIME1-203ENST00000465591 ADGRE1Q14246 886 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 PLCB4Q15147 1175 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 NPY5RQ15761 445 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 PPP2R2DQ66LE6 453 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 BICD2Q8TD16 824 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 LENG9Q96B70 501 aa24.77■■□□□ 1.56
LIME1-203ENST00000465591 MYH9P35579 1960 aaKnown RBP24.76■■□□□ 1.55
LIME1-203ENST00000465591 IGKV6D-21A0A0A0MT36 114 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 MBLAC1A4D2B0 266 aaPredicted RBP24.76■■□□□ 1.55
LIME1-203ENST00000465591 IPO5O00410 1097 aaKnown RBP24.76■■□□□ 1.55
LIME1-203ENST00000465591 CAND2O75155 1236 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 INSRRP14616 1297 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 CIITAP33076 1130 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 AK2P54819 239 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 IGBP1P78318 339 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 PLEKHG4Q58EX7 1191 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 ABHD15Q6UXT9 468 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 TUBE1Q9UJT0 475 aa24.76■■□□□ 1.55
LIME1-203ENST00000465591 LOXHD1Q8IVV2 1947 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 ABHD14A-ACY1A0A1B0GW23 586 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 PFKFB2O60825 505 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 STAT5BP51692 787 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 PRR16Q569H4 304 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 FAM26DQ5JW98 314 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.75■■□□□ 1.55
LIME1-203ENST00000465591 PLPPR4Q7Z2D5 763 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 SPRED2Q7Z698 418 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 TRAPPC12Q8WVT3 735 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 ZNF577Q9BSK1 485 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 AZI2Q9H6S1 392 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 PCDHA4Q9UN74 947 aa24.75■■□□□ 1.55
LIME1-203ENST00000465591 UNC80Q8N2C7 3258 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 M0R2N6 131 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 CTDNEP1O95476 244 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 CHRNA1P02708 482 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 IKBKEQ14164 716 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 CCDC60Q8IWA6 550 aaPredicted RBP24.74■■□□□ 1.55
LIME1-203ENST00000465591 USP38Q8NB14 1042 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 SLKQ9H2G2 1235 aaPredicted RBP24.74■■□□□ 1.55
LIME1-203ENST00000465591 TRPC6Q9Y210 931 aa24.74■■□□□ 1.55
LIME1-203ENST00000465591 A0A0C4DFX4 3053 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 EVPLQ92817 2033 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 LCHNA4D1U4 455 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 LARGE1O95461 756 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 SETQ01105 290 aaPredicted RBP24.73■■□□□ 1.55
LIME1-203ENST00000465591 MGAT3Q09327 533 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 CPLX2Q6PUV4 134 aaKnown RBP24.73■■□□□ 1.55
LIME1-203ENST00000465591 RPAINQ86UA6 219 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 DNAJB3Q8WWF6 145 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 CERS4Q9HA82 394 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 GJB4Q9NTQ9 266 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 KCNJ14Q9UNX9 436 aa24.73■■□□□ 1.55
LIME1-203ENST00000465591 TAP1Q03518 808 aa24.72■■□□□ 1.55
LIME1-203ENST00000465591 TAF2Q6P1X5 1199 aa24.72■■□□□ 1.55
LIME1-203ENST00000465591 BLIDQ8IZY5 108 aa24.72■■□□□ 1.55
LIME1-203ENST00000465591 DAGLBQ8NCG7 672 aa24.72■■□□□ 1.55
LIME1-203ENST00000465591 TBCKQ8TEA7 893 aa24.72■■□□□ 1.55
LIME1-203ENST00000465591 PRRC2BQ5JSZ5 2229 aaKnown RBP24.71■■□□□ 1.55
LIME1-203ENST00000465591 EPOPA6NHQ4 379 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 RRN3P2A6NIE6 340 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 TLL1O43897 1013 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 ATP4AP20648 1035 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 FAM117BQ6P1L5 589 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 NECAB1Q8N987 351 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 GJA10Q969M2 543 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 GAS2L1Q99501 681 aaPredicted RBP24.71■■□□□ 1.55
LIME1-203ENST00000465591 TBC1D22BQ9NU19 505 aa24.71■■□□□ 1.55
LIME1-203ENST00000465591 STK36Q9NRP7 1315 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 POTEB3A0JP26 581 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 KIF28PB7ZC32 967 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 RFXAPO00287 272 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 BACH1O14867 736 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 MSH4O15457 936 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 EFCAB14O75071 495 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 GJB5O95377 273 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 ME3Q16798 604 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 SWSAP1Q6NVH7 229 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 POTEBQ6S5H4 581 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 SEPT8Q92599 483 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 FAM49AQ9H0Q0 323 aaPredicted RBP24.7■■□□□ 1.54
LIME1-203ENST00000465591 ZNF302Q9NR11 478 aa24.7■■□□□ 1.54
LIME1-203ENST00000465591 TDP2O95551 362 aa24.69■■□□□ 1.54
LIME1-203ENST00000465591 GHRP10912 638 aa24.69■■□□□ 1.54
LIME1-203ENST00000465591 USP11P51784 963 aa24.69■■□□□ 1.54
LIME1-203ENST00000465591 ZNF746Q6NUN9 644 aaPredicted RBP24.69■■□□□ 1.54
LIME1-203ENST00000465591 MIS18BP1Q6P0N0 1132 aa24.69■■□□□ 1.54
LIME1-203ENST00000465591 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms