RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 BECN1Q14457 450 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 NBR1Q14596 966 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 GDF6Q6KF10 455 aaPredicted RBP22.89■■□□□ 1.25
PTCD3-206ENST00000465560 TRPV6Q9H1D0 765 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 TMEM60Q9H2L4 133 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 RNPEPQ9H4A4 650 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 PRDM5Q9NQX1 630 aaPredicted RBP22.89■■□□□ 1.25
PTCD3-206ENST00000465560 ZNF302Q9NR11 478 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 TBX21Q9UL17 535 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 ZMYND8Q9ULU4 1186 aaPredicted RBP22.89■■□□□ 1.25
PTCD3-206ENST00000465560 MTMR6Q9Y217 621 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 IGSF9BQ9UPX0 1349 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 HOXC8P31273 242 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 SWSAP1Q6NVH7 229 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 MIER3Q7Z3K6 550 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 SH3RF1Q7Z6J0 888 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 TMEM39AQ9NV64 488 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 PRKAG2Q9UGJ0 569 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 PCDHB6Q9Y5E3 794 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 TANC1Q9C0D5 1861 aa22.88■■□□□ 1.25
PTCD3-206ENST00000465560 TRIM43BA6NCK2 446 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 H0YGN5 161 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 KIAA0355O15063 1070 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 SYN1P17600 705 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 SPIRE1Q08AE8 756 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 PDXDC2PQ6P474 469 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 FERMT3Q86UX7 667 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 SPRYD3Q8NCJ5 442 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 TRIM43Q96BQ3 446 aaPredicted RBP22.87■■□□□ 1.25
PTCD3-206ENST00000465560 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.87■■□□□ 1.25
PTCD3-206ENST00000465560 GABBR1Q9UBS5 961 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 PCDHA12Q9UN75 941 aa22.87■■□□□ 1.25
PTCD3-206ENST00000465560 MAFBQ9Y5Q3 323 aaPredicted RBP22.87■■□□□ 1.25
PTCD3-206ENST00000465560 C17orf102A2RUQ5 167 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 OR52Z1P0C646 297 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 PDIA4P13667 645 aaKnown RBP22.86■■□□□ 1.25
PTCD3-206ENST00000465560 RESTQ13127 1097 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 HIC1Q14526 733 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 PLCB4Q15147 1175 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 PTGISQ16647 500 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 CTAGE1Q96RT6 745 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 TTC12Q9H892 705 aaPredicted RBP22.86■■□□□ 1.25
PTCD3-206ENST00000465560 NOD1Q9Y239 953 aa22.86■■□□□ 1.25
PTCD3-206ENST00000465560 NRCAMQ92823 1304 aa22.85■■□□□ 1.25
PTCD3-206ENST00000465560 EML1O00423 815 aa22.85■■□□□ 1.25
PTCD3-206ENST00000465560 GNAT1P11488 350 aa22.85■■□□□ 1.25
PTCD3-206ENST00000465560 TXKP42681 527 aa22.85■■□□□ 1.25
PTCD3-206ENST00000465560 C4orf32Q8N8J7 132 aa22.85■■□□□ 1.25
PTCD3-206ENST00000465560 TNPO1Q92973 898 aaKnown RBP22.85■■□□□ 1.25
PTCD3-206ENST00000465560 TRPC6Q9Y210 931 aa22.85■■□□□ 1.25
PTCD3-206ENST00000465560 POTEB3A0JP26 581 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 ATP4AP20648 1035 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 PPFIA1Q13136 1202 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 POTEBQ6S5H4 581 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 ATP8B4Q8TF62 1192 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 LMBR1Q8WVP7 490 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 SETD4Q9NVD3 440 aa22.84■■□□□ 1.25
PTCD3-206ENST00000465560 EVPLQ92817 2033 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 LAD1O00515 517 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 CYP2C9P11712 490 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 ADAM17P78536 824 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 ZNF200P98182 395 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-206ENST00000465560 PTGDRQ13258 359 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 EPHA7Q15375 998 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 GRIK4Q16099 956 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 UGCGQ16739 394 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 NCAPH2Q6IBW4 605 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 ATP6V0A1Q93050 837 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 HIPK3Q9H422 1215 aa22.83■■□□□ 1.25
PTCD3-206ENST00000465560 ZSCAN16Q9H4T2 348 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-206ENST00000465560 ZNF862O60290 1169 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 HBP1O60381 514 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 TIMP1P01033 207 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 INSRRP14616 1297 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 RAG1P15918 1043 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 ITGB8P26012 769 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 PTK7Q13308 1070 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 PRPF38BQ5VTL8 546 aaKnown RBP22.82■■□□□ 1.24
PTCD3-206ENST00000465560 CKAP2LQ8IYA6 745 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 BBXQ8WY36 941 aaPredicted RBP22.82■■□□□ 1.24
PTCD3-206ENST00000465560 FAM167AQ96KS9 214 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 NOC4LQ9BVI4 516 aaKnown RBP22.82■■□□□ 1.24
PTCD3-206ENST00000465560 PCDH10Q9P2E7 1040 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 ARID2Q68CP9 1835 aa22.82■■□□□ 1.24
PTCD3-206ENST00000465560 COL1A2P08123 1366 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 RRN3P2A6NIE6 340 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 TREHO43280 583 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 P4HBP07237 508 aaKnown RBP22.81■■□□□ 1.24
PTCD3-206ENST00000465560 PSMC5P62195 406 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 ATP2C1P98194 919 aaPredicted RBP22.81■■□□□ 1.24
PTCD3-206ENST00000465560 PRKCEQ02156 737 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 SERINC5Q86VE9 423 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 BANK1Q8NDB2 785 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 PPP1R12CQ9BZL4 782 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 SCN5AQ14524 2016 aa22.81■■□□□ 1.24
PTCD3-206ENST00000465560 MBLAC1A4D2B0 266 aaPredicted RBP22.8■■□□□ 1.24
PTCD3-206ENST00000465560 POTEMA6NI47 508 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 OATP04181 439 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 PRPHP41219 470 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 TECP42680 631 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms