RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 NAALADL2Q58DX5 795 aa19.29■□□□□ 0.68
PTPRU-206ENST00000465525 KRBA2Q6ZNG9 492 aa19.29■□□□□ 0.68
PTPRU-206ENST00000465525 TRMT1LQ7Z2T5 733 aaKnown RBP19.29■□□□□ 0.68
PTPRU-206ENST00000465525 SH3TC2Q8TF17 1288 aa19.29■□□□□ 0.68
PTPRU-206ENST00000465525 HSD17B14Q9BPX1 270 aa19.29■□□□□ 0.68
PTPRU-206ENST00000465525 HTTP42858 3142 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 GSTTP1A0A1W2PQM5 241 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 GH1P01241 217 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 AKR1A1P14550 325 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 RPA1P27694 616 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 CNGA1P29973 690 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 SFNP31947 248 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 PSMC6P62333 389 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 DHX8Q14562 1220 aaKnown RBP19.28■□□□□ 0.68
PTPRU-206ENST00000465525 DUSP28Q4G0W2 176 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 IQUBQ8NA54 791 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 CNNM3Q8NE01 707 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 ERCC4Q92889 916 aaPredicted RBP19.28■□□□□ 0.68
PTPRU-206ENST00000465525 LXNQ9BS40 222 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 POLR3CQ9BUI4 534 aaPredicted RBP19.28■□□□□ 0.68
PTPRU-206ENST00000465525 CLSTN2Q9H4D0 955 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 PCDHA10Q9Y5I2 948 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 KDM3AQ9Y4C1 1321 aa19.28■□□□□ 0.68
PTPRU-206ENST00000465525 E9PMD0 336 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 ZBTB39O15060 712 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.68
PTPRU-206ENST00000465525 SEPT4O43236 478 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 SUPT20HL2P0C7V6 817 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 AFMP43652 599 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 SWSAP1Q6NVH7 229 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 PDXDC2PQ6P474 469 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 ABHD15Q6UXT9 468 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 CCDC60Q8IWA6 550 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-206ENST00000465525 SMAP1Q8IYB5 467 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-206ENST00000465525 NUP62CLQ9H1M0 184 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 TUFT1Q9NNX1 390 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 HMX1Q9NP08 348 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-206ENST00000465525 GABBR1Q9UBS5 961 aa19.27■□□□□ 0.68
PTPRU-206ENST00000465525 NOP56O00567 594 aaKnown RBP19.27■□□□□ 0.67
PTPRU-206ENST00000465525 BACH1O14867 736 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 PSAPP07602 524 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 CCND3P30281 292 aaPredicted RBP19.27■□□□□ 0.67
PTPRU-206ENST00000465525 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.67
PTPRU-206ENST00000465525 HYIQ5T013 277 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 MIS18BP1Q6P0N0 1132 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 CEP57L1Q8IYX8 460 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 OR6J1Q8NGC5 347 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 PIGOQ8TEQ8 1089 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 AFG1LQ8WV93 481 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 GPR20Q99678 358 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 BLOC1S4Q9NUP1 217 aa19.27■□□□□ 0.67
PTPRU-206ENST00000465525 SLFN14P0C7P3 912 aa19.26■□□□□ 0.67
PTPRU-206ENST00000465525 CASP1P29466 404 aa19.26■□□□□ 0.67
PTPRU-206ENST00000465525 TCF7P36402 384 aaPredicted RBP19.26■□□□□ 0.67
PTPRU-206ENST00000465525 MCM6Q14566 821 aa19.26■□□□□ 0.67
PTPRU-206ENST00000465525 CCDC183Q5T5S1 534 aa19.26■□□□□ 0.67
PTPRU-206ENST00000465525 UTP14CQ5TAP6 766 aaKnown RBP19.26■□□□□ 0.67
PTPRU-206ENST00000465525 STK24Q9Y6E0 443 aa19.26■□□□□ 0.67
PTPRU-206ENST00000465525 TMEM150BA6NC51 233 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 DYNC1LI2O43237 492 aaPredicted RBP19.25■□□□□ 0.67
PTPRU-206ENST00000465525 ATG7O95352 703 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 SSBP05455 408 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTPRU-206ENST00000465525 P4HBP07237 508 aaKnown RBP19.25■□□□□ 0.67
PTPRU-206ENST00000465525 PRR29P0C7W0 189 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 QARSP47897 775 aaKnown RBP19.25■□□□□ 0.67
PTPRU-206ENST00000465525 LAMC2Q13753 1193 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 TRIM50Q86XT4 487 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 CKAP2LQ8IYA6 745 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 RDM1Q8NG50 284 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 SEPT1Q8WYJ6 367 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 RAD54LQ92698 747 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 PCYT2Q99447 389 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 TNMDQ9H2S6 317 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 GNEQ9Y223 722 aaKnown RBP19.25■□□□□ 0.67
PTPRU-206ENST00000465525 Q9Y3F1 56 aa19.25■□□□□ 0.67
PTPRU-206ENST00000465525 DUSP11O75319 330 aaKnown RBP19.24■□□□□ 0.67
PTPRU-206ENST00000465525 PNOCQ13519 176 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 NEK9Q8TD19 979 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-206ENST00000465525 PAGE5Q96GU1 130 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 TIGD1Q96MW7 591 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 MTRQ99707 1265 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 PYM1Q9BRP8 204 aaKnown RBP19.24■□□□□ 0.67
PTPRU-206ENST00000465525 ARID2Q68CP9 1835 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 ZNF862O60290 1169 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 MSCO60682 206 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 PSMC5P62195 406 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 LARP4BQ92615 738 aaKnown RBP19.24■□□□□ 0.67
PTPRU-206ENST00000465525 EMID1Q96A84 441 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-206ENST00000465525 ARMC5Q96C12 935 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 SH2D3AQ9BRG2 576 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 BLZF1Q9H2G9 400 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 ZSWIM4Q9H7M6 989 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 ZNF302Q9NR11 478 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 USP25Q9UHP3 1055 aa19.24■□□□□ 0.67
PTPRU-206ENST00000465525 CENPFP49454 3210 aa19.23■□□□□ 0.67
PTPRU-206ENST00000465525 LOXHD1Q8IVV2 1947 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms